About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS09801MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
HS09802MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
HS09803NEUROTRANSMITTER GATED ION CHANNEL
HS09804RAS-RELATED GTP BINDING RAG/GTR YEAST
HS09805
HS09806
HS09807
HS09808
HS09809ZINC FINGER PROTEIN
HS09810ZINC FINGER AND SCAN DOMAIN-CONTAINING
HS09811REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09812
HS09813
HS09814ODD-SKIPPED - RELATED
HS09815ZINC FINGER AND SCAN DOMAIN-CONTAINING
HS09816
HS09817AGAP001331-PA-RELATED
HS09818
HS09819KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS09820REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09821REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09822REVERSE TRANSCRIPTASES
HS09823REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09824REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09825
HS09826KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS09827REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09828ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS09829REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09830
HS09831ZINC FINGER PROTEIN
HS09832ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
HS09833TRANSCRIPTIONAL REPRESSOR PROTEIN YY
HS09834LYR MOTIF-CONTAINING PROTEIN 9
HS09835COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER
HS09836PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
HS09837REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09838TANDEM PH DOMAIN CONTAINING PROTEIN
HS09839REGULATOR COMPLEX PROTEIN LAMTOR3
HS09840
HS09841GOLGI MEMBRANE PROTEIN YIP1
HS09842ODD-SKIPPED - RELATED
HS09843HEDGEHOG-INTERACTING PROTEIN
HS09844UNCHARACTERIZED
HS09845REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09846IODOTHYRONINE DEIODINASE
HS09847REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS09848APOLIPOPROTEIN B
HS09849ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED
HS09850HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED
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