About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_22102-1.5N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE
Bpl_scaf_22102-1.9DEATH DOMAIN-CONTAINING PROTEIN
Bpl_scaf_22109-0.11SIDESTEP PROTEIN
Bpl_scaf_22109-0.9
Bpl_scaf_22109-1.17IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_22109-1.18
Bpl_scaf_22109-1.23
Bpl_scaf_22109-1.7
Bpl_scaf_22117-0.0
Bpl_scaf_22117-0.3
Bpl_scaf_22117-1.0
Bpl_scaf_22117-1.3
Bpl_scaf_22117-1.4
Bpl_scaf_22117-1.8DUF614 FAMILY PROTEIN-RELATED
Bpl_scaf_22127-0.7
Bpl_scaf_22138-0.2DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN
Bpl_scaf_22141-0.4SI:CH211-189E2.2
Bpl_scaf_22141-0.8TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Bpl_scaf_22141-1.6PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_22141-1.7
Bpl_scaf_22146-0.2EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_22146-0.5
Bpl_scaf_22146-1.7CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_22147-0.0
Bpl_scaf_22155-0.5ADHESION G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_22155-1.15RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_22160-0.8SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Bpl_scaf_22160-0.9
Bpl_scaf_22160-1.0
Bpl_scaf_22160-1.13APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_22160-1.14
Bpl_scaf_22160-1.19
Bpl_scaf_22160-1.22SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_22166-0.0
Bpl_scaf_22167-0.1
Bpl_scaf_22178-0.3G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_22178-0.4OS-9-RELATED
Bpl_scaf_22178-1.10G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_22178-1.12G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_2218-0.11NNMT/PNMT/TEMT FAMILY MEMBER
Bpl_scaf_2218-0.5
Bpl_scaf_22184-0.1
Bpl_scaf_22184-0.2
Bpl_scaf_22188-0.1HELICASE WITH DEATH DOMAIN-RELATED
Bpl_scaf_22192-0.5UNCHARACTERIZED
Bpl_scaf_22192-0.8
Bpl_scaf_22192-1.11KELCH PROTEIN
Bpl_scaf_22192-2.0HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
Bpl_scaf_22192-2.5REGULATOR OF MICROTUBULE DYNAMICS PROTEIN
Bpl_scaf_22193-0.1
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