About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_21376-1.18KU AUTOANTIGEN DNA HELICASE
Bpl_scaf_21376-1.19SERINE/THREONINE-PROTEIN KINASE
Bpl_scaf_21376-1.27CARBOXYMETHYLENEBUTENOLIDASE-RELATED
Bpl_scaf_21377-0.3
Bpl_scaf_21389-1.15T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Bpl_scaf_21389-1.18ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_21389-1.19INOSITOL POLYPHOSPHATE KINASE
Bpl_scaf_21389-1.21CEREBELLIN-RELATED
Bpl_scaf_21389-1.27
Bpl_scaf_21389-1.28
Bpl_scaf_21389-1.30SERINE/THREONINE-PROTEIN KINASE NEK
Bpl_scaf_21397-0.0
Bpl_scaf_21410-1.18TELOMERASE PROTEIN COMPONENT 1 TEP1
Bpl_scaf_21410-1.19INSCUTEABLE
Bpl_scaf_21410-1.25UPF0041 BRAIN PROTEIN 44-RELATED
Bpl_scaf_21410-1.29KINETOCHORE PROTEIN NDC80
Bpl_scaf_21419-1.11
Bpl_scaf_21419-2.14
Bpl_scaf_21419-2.16
Bpl_scaf_21426-0.2SI:CH211-262H13.3-RELATED-RELATED
Bpl_scaf_21432-0.0
Bpl_scaf_21432-0.11REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_21432-0.14
Bpl_scaf_21432-0.15OS05G0424000 PROTEIN-RELATED
Bpl_scaf_21432-0.8AMINO ACID TRANSPORTER
Bpl_scaf_21432-1.3HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_21432-1.8UNCHARACTERIZED
Bpl_scaf_21432-2.34
Bpl_scaf_21432-2.4ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_21432-2.5
Bpl_scaf_21432-2.8SENTRIN-SPECIFIC PROTEASE
Bpl_scaf_21437-0.0BTB AND MATH DOMAIN-CONTAINING PROTEIN 36-RELATED
Bpl_scaf_21442-0.0
Bpl_scaf_21442-0.1
Bpl_scaf_21443-1.16MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
Bpl_scaf_21443-1.4ACTIN
Bpl_scaf_21443-2.15SUPPRESSOR OF FUSED
Bpl_scaf_21443-2.16
Bpl_scaf_21443-2.17ZINC FINGER PROTEIN
Bpl_scaf_21443-2.18
Bpl_scaf_21447-0.0OLIGORIBONUCLEASE, MITOCHONDRIAL
Bpl_scaf_21453-2.16SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_21453-2.21
Bpl_scaf_21453-2.28
Bpl_scaf_21453-2.29TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Bpl_scaf_21453-2.31EPHRIN TYPE-B RECEPTOR
Bpl_scaf_21453-2.32
Bpl_scaf_21453-2.33
Bpl_scaf_21453-2.37
Bpl_scaf_21453-2.38
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