The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032868421.1 | SI:CH211-266K2.1 |
| XP_032868422.1 | SI:CH211-266K2.1 |
| XP_032868423.1 | SI:CH211-266K2.1 |
| XP_032868424.1 | SI:CH211-266K2.1 |
| XP_032868425.1 | SI:CH211-266K2.1 |
| XP_032868426.1 | DUF4605 DOMAIN-CONTAINING PROTEIN |
| XP_032868427.1 | PERICENTRIN-LIKE PROTEIN, ISOFORM F |
| XP_032868428.1 | SHIELDIN COMPLEX SUBUNIT 2 |
| XP_032868429.1 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| XP_032868430.1 | TETRASPANIN |
| XP_032868431.1 | FLAVIN MONOAMINE OXIDASE |
| XP_032868432.1 | |
| XP_032868433.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| XP_032868434.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| XP_032868435.1 | PERICENTRIN-LIKE PROTEIN, ISOFORM F |
| XP_032868436.1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| XP_032868437.1 | APOPTOSIS-INDUCING FACTOR 1 |
| XP_032868438.1 | PHOSPHOLIPASE A2 FAMILY MEMBER |
| XP_032868439.1 | |
| XP_032868440.1 | DNA-DAMAGE-INDUCIBLE TRANSCRIPT 4 PROTEIN DDIT4 |
| XP_032868441.1 | TGF-BETA FAMILY |
| XP_032868442.1 | PERICENTRIN-LIKE PROTEIN, ISOFORM F |
| XP_032868443.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
| XP_032868444.1 | WNT RELATED |
| XP_032868445.1 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
| XP_032868446.1 | |
| XP_032868447.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032868448.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032868449.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032868450.1 | PERICENTRIN-LIKE PROTEIN, ISOFORM F |
| XP_032868451.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032868452.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032868453.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032868454.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| XP_032868455.1 | HISTONE H2A |
| XP_032868456.1 | HISTONE H2A |
| XP_032868457.1 | HISTONE H2A |
| XP_032868458.1 | HISTONE H2A |
| XP_032868459.1 | HISTONE H2A |
| XP_032868460.1 | GRB2-ASSOCIATED-BINDING PROTEIN |
| XP_032868461.1 | HISTONE H2A |
| XP_032868462.1 | HISTONE H2A |
| XP_032868463.1 | HISTONE H2A |
| XP_032868464.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032868465.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032868466.1 | TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL |
| XP_032868467.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032868468.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032868469.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032868470.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
