The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032868121.1 | RFX TRANSCRIPTION FACTOR FAMILY |
| XP_032868122.1 | RFX TRANSCRIPTION FACTOR FAMILY |
| XP_032868123.1 | CATION-TRANSPORTING ATPASE-RELATED |
| XP_032868124.1 | CATION-TRANSPORTING ATPASE-RELATED |
| XP_032868125.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| XP_032868126.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| XP_032868127.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| XP_032868128.1 | ZONA PELLUCIDA BINDING PROTEIN SP38 |
| XP_032868129.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032868130.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032868131.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032868132.1 | INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA |
| XP_032868133.1 | INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA |
| XP_032868134.1 | - |
| XP_032868135.1 | - |
| XP_032868136.1 | - |
| XP_032868137.1 | - |
| XP_032868138.1 | MUCOLIPIN |
| XP_032868139.1 | MUCOLIPIN |
| XP_032868140.1 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| XP_032868141.1 | IFT57/HIPPI |
| XP_032868142.1 | UNCHARACTERIZED |
| XP_032868143.1 | UNCHARACTERIZED |
| XP_032868144.1 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
| XP_032868145.1 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| XP_032868146.1 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
| XP_032868147.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032868148.1 | IFT57/HIPPI |
| XP_032868149.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| XP_032868150.1 | UBIQUITIN-LIKE PROTEIN 5 |
| XP_032868151.1 | UBIQUITIN-LIKE PROTEIN 5 |
| XP_032868152.1 | UBIQUITIN-LIKE PROTEIN 5 |
| XP_032868153.1 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
| XP_032868154.1 | AAA-FAMILY ATPASE |
| XP_032868155.1 | AAA-FAMILY ATPASE |
| XP_032868156.1 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
| XP_032868157.1 | GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL |
| XP_032868158.1 | GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL |
| XP_032868159.1 | SYNAPTONEMAL COMPLEX CENTRAL ELEMENT PROTEIN 2 |
| XP_032868160.1 | SPERMATHECAL PHYSIOLOGY VARIANT |
| XP_032868161.1 | MALE FERTILITY FACTOR KL5 |
| XP_032868162.1 | SPERMATHECAL PHYSIOLOGY VARIANT |
| XP_032868163.1 | SPERMATHECAL PHYSIOLOGY VARIANT |
| XP_032868164.1 | SPERMATHECAL PHYSIOLOGY VARIANT |
| XP_032868165.1 | SPERMATHECAL PHYSIOLOGY VARIANT |
| XP_032868166.1 | 41-2 PROTEIN ANTIGEN-RELATED |
| XP_032868167.1 | 41-2 PROTEIN ANTIGEN-RELATED |
| XP_032868168.1 | 41-2 PROTEIN ANTIGEN-RELATED |
| XP_032868169.1 | 41-2 PROTEIN ANTIGEN-RELATED |
| XP_032868170.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
