The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032868071.1 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5 |
| XP_032868072.1 | A-KINASE ANCHOR PROTEIN AKAP 8 |
| XP_032868073.1 | A-KINASE ANCHOR PROTEIN AKAP 8 |
| XP_032868074.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| XP_032868075.1 | SHUGOSHIN |
| XP_032868076.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| XP_032868077.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| XP_032868078.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| XP_032868079.1 | LEUCINE RICH REPEAT PROTEIN |
| XP_032868080.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| XP_032868081.1 | TYROSINE-PROTEIN KINASE HOPSCOTCH |
| XP_032868082.1 | TYROSINE-PROTEIN KINASE HOPSCOTCH |
| XP_032868083.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
| XP_032868084.1 | SHUGOSHIN |
| XP_032868085.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
| XP_032868086.1 | CHYMOTRYPSIN-RELATED |
| XP_032868087.1 | PURKINJE CELL PROTEIN 2 |
| XP_032868088.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| XP_032868089.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| XP_032868090.1 | ZINC FINGER PROTEIN |
| XP_032868091.1 | FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS |
| XP_032868092.1 | ZINC FINGER PROTEIN 142 |
| XP_032868093.1 | MACROGLOBULIN / COMPLEMENT |
| XP_032868094.1 | MACROGLOBULIN / COMPLEMENT |
| XP_032868095.1 | MACROGLOBULIN / COMPLEMENT |
| XP_032868096.1 | NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A |
| XP_032868097.1 | NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A |
| XP_032868098.1 | NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A |
| XP_032868099.1 | ALPHA-CATULIN |
| XP_032868100.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 15 |
| XP_032868101.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 15 |
| XP_032868102.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 15 |
| XP_032868103.1 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
| XP_032868104.1 | CYSTEINE PROTEASE ATG4 |
| XP_032868105.1 | CYSTEINE PROTEASE ATG4 |
| XP_032868106.1 | CYSTEINE PROTEASE ATG4 |
| XP_032868107.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| XP_032868108.1 | POLYCOMB GROUP PROTEIN |
| XP_032868109.1 | UNCHARACTERIZED |
| XP_032868110.1 | NIBAN FAMILY MEMBER |
| XP_032868111.1 | NIBAN FAMILY MEMBER |
| XP_032868112.1 | NIBAN FAMILY MEMBER |
| XP_032868113.1 | 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE |
| XP_032868114.1 | NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT |
| XP_032868115.1 | NUCLEOREDOXIN-LIKE PROTEIN 1 |
| XP_032868116.1 | UNCHARACTERIZED |
| XP_032868117.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
| XP_032868118.1 | GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEINS-INTERACTING PROTEIN 1 GADD45GIP1 |
| XP_032868119.1 | RFX TRANSCRIPTION FACTOR FAMILY |
| XP_032868120.1 | RFX TRANSCRIPTION FACTOR FAMILY |
