The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032868271.1 | NEGATIVE ELONGATION FACTOR E |
| XP_032868272.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032868273.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032868274.1 | NXPE FAMILY MEMBER |
| XP_032868275.1 | FAM187 |
| XP_032868276.1 | TUBULIN |
| XP_032868277.1 | GOLGI-ASSOCIATED PROTEIN GCP360-RELATED |
| XP_032868278.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868279.1 | TUBULIN |
| XP_032868280.1 | TUBULIN |
| XP_032868281.1 | |
| XP_032868282.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868283.1 | |
| XP_032868284.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032868285.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868286.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868287.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868288.1 | DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN |
| XP_032868289.1 | |
| XP_032868290.1 | |
| XP_032868291.1 | |
| XP_032868292.1 | DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN |
| XP_032868293.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868294.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032868295.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868296.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868297.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032868298.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032868299.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032868300.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868301.1 | FAM187 |
| XP_032868302.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868303.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032868304.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032868305.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868306.1 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
| XP_032868307.1 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
| XP_032868308.1 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
| XP_032868309.1 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
| XP_032868310.1 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
| XP_032868311.1 | CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL |
| XP_032868312.1 | CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL |
| XP_032868313.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| XP_032868314.1 | NEURONAL VESICLE TRAFFICKING-ASSOCIATED PROTEIN 2-RELATED |
| XP_032868315.1 | NEURONAL VESICLE TRAFFICKING-ASSOCIATED PROTEIN 2-RELATED |
| XP_032868316.1 | NEURONAL VESICLE TRAFFICKING-ASSOCIATED PROTEIN 2-RELATED |
| XP_032868317.1 | V-SET AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN |
| XP_032868318.1 | V-SET AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN |
| XP_032868319.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868320.1 | PSEUDOURIDYLATE SYNTHASE |
