The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032868221.1 | TFIIF-ALPHA |
| XP_032868222.1 | 6-PHOSPHOGLUCONOLACTONASE |
| XP_032868223.1 | PROTEIN DR1 |
| XP_032868224.1 | PROTEIN DR1 |
| XP_032868225.1 | ANTI-SILENCING PROTEIN 1 |
| XP_032868226.1 | LUNG SEVEN TRANSMEMBRANE RECEPTOR |
| XP_032868227.1 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| XP_032868228.1 | RETINOL DEHYDROGENASE-RELATED |
| XP_032868229.1 | PETER PAN-RELATED |
| XP_032868230.1 | PETER PAN-RELATED |
| XP_032868231.1 | PETER PAN-RELATED |
| XP_032868232.1 | PETER PAN-RELATED |
| XP_032868233.1 | PETER PAN-RELATED |
| XP_032868234.1 | PETER PAN-RELATED |
| XP_032868235.1 | PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032868236.1 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| XP_032868237.1 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| XP_032868238.1 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| XP_032868239.1 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| XP_032868240.1 | PROLINE-RICH PROTEIN 19 |
| XP_032868241.1 | PROLINE-RICH PROTEIN 19 |
| XP_032868242.1 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| XP_032868243.1 | PRENYLATED RAB ACCEPTOR 1-RELATED |
| XP_032868244.1 | PRENYLATED RAB ACCEPTOR 1-RELATED |
| XP_032868245.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032868246.1 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
| XP_032868247.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032868248.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032868249.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| XP_032868250.1 | PROLYL HYDROXYLASE-RELATED |
| XP_032868251.1 | FAM187 |
| XP_032868252.1 | TUBULIN |
| XP_032868253.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868254.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| XP_032868255.1 | NEGATIVE ELONGATION FACTOR E |
| XP_032868256.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032868257.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| XP_032868258.1 | BAX INHIBITOR-RELATED |
| XP_032868259.1 | |
| XP_032868260.1 | |
| XP_032868261.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868262.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868263.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032868264.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868265.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868266.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868267.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868268.1 | GATA ZINC FINGER DOMAIN-CONTAINING |
| XP_032868269.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032868270.1 |
