The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032868521.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868522.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868523.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868524.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868525.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868526.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868527.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868528.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868529.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868530.1 | PROTEIN CBG20567 |
| XP_032868531.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868532.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868533.1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| XP_032868534.1 | VINCULIN |
| XP_032868535.1 | VINCULIN |
| XP_032868536.1 | VINCULIN |
| XP_032868537.1 | VINCULIN |
| XP_032868538.1 | AP COMPLEX SUBUNIT MU |
| XP_032868539.1 | GRB2-ASSOCIATED-BINDING PROTEIN |
| XP_032868540.1 | AP COMPLEX SUBUNIT MU |
| XP_032868541.1 | ADENOSINE KINASE |
| XP_032868542.1 | ADENOSINE KINASE |
| XP_032868543.1 | ADENOSINE KINASE |
| XP_032868544.1 | ADENOSINE KINASE |
| XP_032868545.1 | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE |
| XP_032868546.1 | O-METHYLTRANSFERASE-RELATED |
| XP_032868547.1 | O-METHYLTRANSFERASE-RELATED |
| XP_032868548.1 | HOMEOBOX PROTEIN ARISTALESS |
| XP_032868549.1 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| XP_032868550.1 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| XP_032868551.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868552.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868553.1 | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE |
| XP_032868554.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868555.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868556.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868557.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868558.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868559.1 | PDZ AND LIM DOMAIN PROTEIN ZASP |
| XP_032868560.1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| XP_032868561.1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| XP_032868562.1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| XP_032868563.1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| XP_032868564.1 | - |
| XP_032868565.1 | CALPAIN, SMALL SUBUNIT 1 A-RELATED |
| XP_032868566.1 | UPF0728 PROTEIN C10ORF53 |
| XP_032868567.1 | |
| XP_032868568.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032868569.1 | SEC24-RELATED PROTEIN |
| XP_032868570.1 | SEC24-RELATED PROTEIN |
