About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf12106_1.6
PE_Scaf12109_0.0
PE_Scaf12109_0.1
PE_Scaf12109_1.7UNCHARACTERIZED
PE_Scaf12109_1.8EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
PE_Scaf1210_0.0
PE_Scaf12115_0.0
PE_Scaf12115_0.1
PE_Scaf12119_1.0
PE_Scaf12123_3.5PKSB
PE_Scaf12123_4.12
PE_Scaf12123_4.7GAMMA TUBULIN COMPLEX PROTEIN
PE_Scaf12123_4.9AGAP008221-PA
PE_Scaf12126_1.5ZINC FINGER-CONTAINING PROTEIN P48ZNF
PE_Scaf12126_2.3
PE_Scaf12127_3.0
PE_Scaf12127_3.2EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
PE_Scaf12127_5.5
PE_Scaf12128_0.6CENTROSOME-ASSOCIATED PROTEIN 350
PE_Scaf12128_0.8CENTROSOME-ASSOCIATED PROTEIN 350
PE_Scaf12135_0.14CYTOKINE RECEPTOR
PE_Scaf12135_0.15SRCR DOMAIN-CONTAINING PROTEIN
PE_Scaf12135_0.16
PE_Scaf12135_0.17
PE_Scaf12138_0.0
PE_Scaf12138_0.6
PE_Scaf12138_0.9
PE_Scaf12140_0.1
PE_Scaf12140_0.5
PE_Scaf12140_1.1FORMATE LYASE ACTIVATING ENZYME, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G15630)-RELATED
PE_Scaf12140_3.5IG-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf12140_3.6SRC-ASSOCIATED ADAPTOR PROTEIN
PE_Scaf12140_3.7ARMADILLO-TYPE FOLD-RELATED
PE_Scaf12143_0.0CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
PE_Scaf12144_0.3NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf12144_1.0
PE_Scaf12149_0.0
PE_Scaf12149_0.2
PE_Scaf12149_2.4UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PE_Scaf1214_0.3
PE_Scaf12150_0.2
PE_Scaf12150_1.0
PE_Scaf12150_1.10RHO GTPASE-ACTIVATING PROTEIN 68F
PE_Scaf12150_1.11
PE_Scaf12150_1.14
PE_Scaf12150_1.3
PE_Scaf12150_1.4MYOTROPHIN
PE_Scaf12151_0.1AP-5 COMPLEX SUBUNIT MU-1
PE_Scaf12151_1.11ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6
PE_Scaf12151_1.13EG:80H7.2 PROTEIN
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