About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf12022_11.4SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PE_Scaf12022_2.0
PE_Scaf12022_2.10MUCIN 4-RELATED
PE_Scaf12022_2.11
PE_Scaf12022_6.2UNCHARACTERIZED
PE_Scaf12022_8.1
PE_Scaf12022_8.15NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED
PE_Scaf12022_8.16ANNEXIN
PE_Scaf12022_8.3UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
PE_Scaf12022_9.4EGF-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf12024_0.2CONTACTIN 5
PE_Scaf12024_13.6MUCIN 4-RELATED
PE_Scaf12024_13.7METALLOPHOSPHOESTERASE
PE_Scaf12024_13.8BETA TRANSDUCIN-RELATED PROTEIN
PE_Scaf12024_2.1-
PE_Scaf12024_4.3
PE_Scaf12024_5.3NOTCH LIGAND FAMILY MEMBER
PE_Scaf12024_6.3-
PE_Scaf12024_6.4-
PE_Scaf12024_7.7EG:80H7.2 PROTEIN
PE_Scaf12024_7.8
PE_Scaf12024_8.460S RIBOSOMAL PROTEIN L7
PE_Scaf12024_9.1PORCUPINE
PE_Scaf12025_0.0ACYL-COA DEHYDROGENASE
PE_Scaf12025_0.2
PE_Scaf12025_1.3AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf12027_0.0
PE_Scaf12027_1.4
PE_Scaf12027_2.2
PE_Scaf12027_2.3
PE_Scaf12027_5.0
PE_Scaf12027_5.3
PE_Scaf12027_6.4
PE_Scaf12027_8.6LUPUS LA PROTEIN-RELATED
PE_Scaf12027_8.7
PE_Scaf12029_0.1
PE_Scaf12029_1.2AQUAPORIN OR AQUAGLYCEROPORIN RELATED
PE_Scaf12029_3.6
PE_Scaf12035_0.6PERIOSTIN-RELATED
PE_Scaf12037_2.19HOMEOBOX PROTEIN NKX
PE_Scaf12037_2.20HOMEOBOX PROTEIN NKX
PE_Scaf12037_4.35'->3' EXORIBONUCLEASE
PE_Scaf12037_6.11NEPHROCYSTIN
PE_Scaf12037_6.6MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
PE_Scaf12037_7.2TRANSMEMBRANE PROTEIN 72
PE_Scaf12037_9.0
PE_Scaf12037_9.12
PE_Scaf12037_9.7
PE_Scaf12037_9.8
PE_Scaf12038_0.0
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