About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf11862_3.7PROTEIN EVA-1
PE_Scaf11863_0.0
PE_Scaf11863_0.1
PE_Scaf11863_0.18DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER
PE_Scaf11863_0.21UPF0722 PROTEIN C11ORF88
PE_Scaf11863_0.22RIKEN CDNA 2310061I04 GENE
PE_Scaf11864_0.0
PE_Scaf11864_0.1
PE_Scaf11864_0.2
PE_Scaf11866_0.4
PE_Scaf11867_0.4VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
PE_Scaf11871_0.4TYROSINE-PROTEIN KINASE RECEPTOR
PE_Scaf11874_0.4AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf11875_0.2
PE_Scaf11879_0.3HIGH-AFFINITY CHOLINE TRANSPORTER 1
PE_Scaf1187_0.0
PE_Scaf1187_0.1
PE_Scaf1187_0.2
PE_Scaf1187_0.3
PE_Scaf11887_0.2REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
PE_Scaf11887_0.3
PE_Scaf11888_1.3
PE_Scaf11888_1.4TETRASPANIN
PE_Scaf1188_0.6SECRETED MODULAR CALCIUM-BINDING PROTEIN
PE_Scaf1188_1.6
PE_Scaf1188_1.7PROTEIN AMBP
PE_Scaf11892_0.4
PE_Scaf11893_2.10UNCHARACTERIZED
PE_Scaf11893_2.12TBC1 DOMAIN FAMILY MEMBER 19
PE_Scaf11893_2.13
PE_Scaf11894_0.0
PE_Scaf11897_1.0
PE_Scaf11897_1.27
PE_Scaf11897_1.28IONOTROPIC GLUTAMATE RECEPTOR
PE_Scaf11897_1.29
PE_Scaf11897_1.30
PE_Scaf11897_1.31WD REPEAT-CONTAINING PROTEIN 55
PE_Scaf11897_1.33
PE_Scaf1189_0.6SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PE_Scaf1189_0.7NUCLEOTIDE KINASE
PE_Scaf1189_0.8SORTING NEXIN 17 AND 27
PE_Scaf118_0.0
PE_Scaf118_0.10
PE_Scaf118_0.5
PE_Scaf118_1.4PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3
PE_Scaf118_3.0
PE_Scaf11900_2.0AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf11900_2.4AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf11901_0.0
PE_Scaf11901_0.4
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