About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf11793_4.0
PE_Scaf11793_4.4
PE_Scaf11793_5.4SODIUM/NUCLEOSIDE COTRANSPORTER
PE_Scaf11793_5.5SODIUM/NUCLEOSIDE COTRANSPORTER
PE_Scaf11793_6.4
PE_Scaf11793_8.5SI:CH211-262H13.3-RELATED-RELATED
PE_Scaf11794_0.1SYNAPTOGYRIN
PE_Scaf11794_1.4EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED
PE_Scaf11794_1.5GTP-BINDING PROTEIN ALPHA SUBUNIT
PE_Scaf11796_0.10DYNAMIN
PE_Scaf11796_0.13
PE_Scaf11796_0.3EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
PE_Scaf11796_0.9NUCLEAR RNA EXPORT FACTOR
PE_Scaf11797_0.0
PE_Scaf11797_10.5PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR
PE_Scaf11797_11.3SHIPPO-1-RELATED
PE_Scaf11797_11.6SHIPPO-1-RELATED
PE_Scaf11797_12.3NEL HOMOLOG
PE_Scaf11797_15.5UBIQUITIN-CONJUGATING ENZYME E2
PE_Scaf11797_17.5ACETYL-COA CARBOXYLASE, ISOFORM A
PE_Scaf11797_18.5MYOTROPHIN
PE_Scaf11797_18.6GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN
PE_Scaf11797_18.7CENTROSOMAL PROTEIN 2
PE_Scaf11797_19.7TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1
PE_Scaf11797_22.0
PE_Scaf11797_22.4LYMPHOID-RESTRICTED MEMBRANE PROTEIN, JAW1
PE_Scaf11797_3.3CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B
PE_Scaf11797_3.4RE42071P
PE_Scaf11797_5.4AROMATIC AMINO ACID HYDROXYLASE
PE_Scaf11797_6.1
PE_Scaf11797_6.3ZINC FINGER PROTEIN
PE_Scaf11797_7.3TAXILIN
PE_Scaf11797_7.6NADPH OXIDASE
PE_Scaf11797_8.7
PE_Scaf11797_9.4AMINO ACID TRANSPORTER
PE_Scaf11797_9.8PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
PE_Scaf11798_0.11
PE_Scaf1179_0.12
PE_Scaf1179_0.5MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
PE_Scaf1179_0.7MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
PE_Scaf1179_0.8MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
PE_Scaf117_3.0
PE_Scaf117_5.0SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
PE_Scaf117_7.7ANKYRIN REPEAT PROTEIN
PE_Scaf11801_0.3COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 7
PE_Scaf11803_0.1GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED
PE_Scaf11805_0.1
PE_Scaf11805_0.2
PE_Scaf11805_0.5FMRFAMIDE RECEPTOR-RELATED
PE_Scaf11805_2.3TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE
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