About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf12050_5.3
PE_Scaf12050_7.2
PE_Scaf12050_8.0
PE_Scaf12050_8.2SET DOMAIN-CONTAINING PROTEIN-RELATED
PE_Scaf12054_0.0
PE_Scaf12054_0.1
PE_Scaf12054_0.11
PE_Scaf12054_0.12
PE_Scaf12054_0.2
PE_Scaf12054_0.22
PE_Scaf12054_0.24LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf12054_0.5
PE_Scaf12054_0.7
PE_Scaf12056_0.4ZINC FINGER AND SCAN DOMAIN-CONTAINING
PE_Scaf12059_0.1
PE_Scaf12060_0.4CHITINASE
PE_Scaf12060_0.6FORKHEAD BOX PROTEIN H1
PE_Scaf12060_0.8
PE_Scaf12063_1.5SELENOPROTEIN O
PE_Scaf12063_3.2GATA ZINC FINGER DOMAIN-CONTAINING
PE_Scaf12063_4.3
PE_Scaf12063_5.0
PE_Scaf12063_6.1
PE_Scaf12063_6.15NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR
PE_Scaf12063_6.2
PE_Scaf12065_1.3
PE_Scaf1206_1.6RHOMBOID-RELATED PROTEIN
PE_Scaf1206_2.3DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
PE_Scaf1206_2.4ORGANIC ANION TRANSPORTER
PE_Scaf1206_4.5HSC70CB, ISOFORM G-RELATED
PE_Scaf1206_4.6FI24210P1
PE_Scaf1206_4.8VOLTAGE-GATED POTASSIUM CHANNEL
PE_Scaf12071_0.0
PE_Scaf12072_1.1CRUMBS FAMILY MEMBER
PE_Scaf12074_0.0
PE_Scaf12074_0.3
PE_Scaf12074_0.8AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf12076_0.0
PE_Scaf12076_0.2
PE_Scaf12077_0.0
PE_Scaf12078_0.0
PE_Scaf12078_2.12SERINE/ARGININE RICH SPLICING FACTOR
PE_Scaf12078_2.14SERINE/ARGININE RICH SPLICING FACTOR
PE_Scaf12078_2.4NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
PE_Scaf12078_2.6SERINE/ARGININE RICH SPLICING FACTOR
PE_Scaf1207_0.2
PE_Scaf1207_0.7DOUBLE ZINC RIBBON AND ANKYRIN REPEAT-CONTAINING PROTEIN 1
PE_Scaf1207_0.8SERINE-THREONINE PROTEIN KINASE
PE_Scaf12080_2.4PEPTIDE CHAIN RELEASE FACTOR
PE_Scaf12080_3.10-
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