About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf12099_6.9POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
PE_Scaf1209_0.0
PE_Scaf120_2.6PROTEIN DISPATCHED-RELATED
PE_Scaf12100_2.4
PE_Scaf12100_5.2
PE_Scaf12100_5.3
PE_Scaf12100_5.7OVOCHYMASE-RELATED
PE_Scaf12100_6.10
PE_Scaf12100_6.11CRUMBS FAMILY MEMBER
PE_Scaf12100_6.12
PE_Scaf12100_6.13
PE_Scaf12100_6.14
PE_Scaf12101_0.5
PE_Scaf12101_10.4EXPRESSED PROTEIN
PE_Scaf12101_10.5
PE_Scaf12101_11.3KREMEN PROTEIN
PE_Scaf12101_12.1
PE_Scaf12101_13.0
PE_Scaf12101_14.2RAD50
PE_Scaf12101_16.4GPI TRANSAMIDASE COMPONENT PIG-T-RELATED
PE_Scaf12101_16.5TRANSMEMBRANE PROTEIN 64
PE_Scaf12101_17.1LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf12101_18.0
PE_Scaf12101_19.1METABOTROPIC GLUTAMATE RECEPTOR
PE_Scaf12101_2.4PHOSPHOSERINE PHOSPHATASE
PE_Scaf12101_20.4
PE_Scaf12101_3.7BTB/POZ DOMAIN-CONTAINING
PE_Scaf12101_3.8INNEXIN
PE_Scaf12101_5.5
PE_Scaf12101_5.6INNEXIN
PE_Scaf12101_6.0PROTEIN CBG17025
PE_Scaf12101_8.3
PE_Scaf12102_0.0
PE_Scaf12102_1.1
PE_Scaf12102_1.2
PE_Scaf12102_1.5BETA-1,4-GALACTOSYLTRANSFERASE
PE_Scaf12102_1.8BETA-1,4-GALACTOSYLTRANSFERASE
PE_Scaf12102_3.11MOTILE SPERM DOMAIN-CONTAINING PROTEIN 1
PE_Scaf12102_3.14LD41958P
PE_Scaf12102_3.2
PE_Scaf12102_3.4LP04239P
PE_Scaf12102_3.6
PE_Scaf12102_4.2INTEGRAL TRANSMEMBRANE PROTEIN 2
PE_Scaf12102_5.3
PE_Scaf12102_6.7PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED
PE_Scaf12102_6.9PARANEOPLASTIC ANTIGEN
PE_Scaf12102_7.0
PE_Scaf12102_8.2NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
PE_Scaf12106_0.1
PE_Scaf12106_0.3
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