About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 699 700 701 702 703 704 705 706 707 708 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_038123-T1
OS493_038124-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_038125-T1FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
OS493_038126-T1
OS493_038127-T1
OS493_038128-T1
OS493_038129-T1
OS493_038131-T1
OS493_038132-T1
OS493_038133-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
OS493_038135-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
OS493_038136-T1
OS493_038137-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
OS493_038138-T1ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1
OS493_038139-T1
OS493_038141-T11-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
OS493_038144-T1
OS493_038145-T1
OS493_038146-T1
OS493_038147-T1
OS493_038148-T1
OS493_038149-T1GLYCOSYLTRANSFERASE
OS493_038150-T1GLYCOSYLTRANSFERASE
OS493_038152-T1
OS493_038153-T1SPERMATOGENESIS-ASSOCIATED PROTEIN 48
OS493_038154-T1PROTEIN CBG20567
OS493_038155-T1
OS493_038156-T1
OS493_038157-T1OS05G0345500 PROTEIN
OS493_038158-T1
OS493_038159-T1GOLGIN- RELATED
OS493_038160-T1GOLGIN- RELATED
OS493_038161-T1
OS493_038162-T1METHYLTRANSFERASE
OS493_038163-T1
OS493_038164-T1
OS493_038165-T1
OS493_038166-T1
OS493_038167-T1
OS493_038168-T1COLD SHOCK DOMAIN CONTAINING PROTEINS
OS493_038169-T1
OS493_038170-T1
OS493_038171-T1
OS493_038172-T1STAR-RELATED LIPID TRANSFER PROTEIN 9
OS493_038177-T1
OS493_038179-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_038180-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_038181-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_038182-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_038183-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
TOP