The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032903171.1 | UBX-RELATED |
| XP_032903172.1 | UBX-RELATED |
| XP_032903173.1 | UBX-RELATED |
| XP_032903174.1 | CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A |
| XP_032903175.1 | RNA BINDING PROTEIN |
| XP_032903176.1 | CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A |
| XP_032903177.1 | CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A |
| XP_032903178.1 | CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A |
| XP_032903179.1 | LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1 |
| XP_032903180.1 | HISTONE H4 |
| XP_032903181.1 | HISTONE H2A |
| XP_032903182.1 | RNA BINDING PROTEIN |
| XP_032903183.1 | HISTONE H2B |
| XP_032903184.1 | |
| XP_032903185.1 | INTERLEUKIN-27 SUBUNIT BETA |
| XP_032903186.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032903187.1 | SYNTAXIN |
| XP_032903188.1 | COLLAGEN ALPHA |
| XP_032903189.1 | INTEGRIN ALPHA |
| XP_032903190.1 | HISTONE H2B |
| XP_032903191.1 | HISTONE H4 |
| XP_032903192.1 | |
| XP_032903193.1 | COMPLEXIN |
| XP_032903194.1 | COLLAGEN ALPHA |
| XP_032903195.1 | COMPLEXIN |
| XP_032903196.1 | HISTONE H2B |
| XP_032903197.1 | |
| XP_032903198.1 | HISTONE H4 |
| XP_032903199.1 | HISTONE H2A |
| XP_032903200.1 | HISTONE H2A |
| XP_032903201.1 | HISTONE H2A |
| XP_032903202.1 | COLLAGEN ALPHA |
| XP_032903203.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032903204.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT-ASSOCIATED REGULATORY PROTEIN |
| XP_032903205.1 | PROTEIN CBG26694 |
| XP_032903206.1 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| XP_032903207.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| XP_032903208.1 | COLLAGEN ALPHA |
| XP_032903209.1 | CELL ADHESION MOLECULE |
| XP_032903210.1 | INTERLEUKIN-27 SUBUNIT BETA |
| XP_032903211.1 | ZINC FINGER PROTEIN |
| XP_032903212.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| XP_032903213.1 | ILGF DOMAIN-CONTAINING PROTEIN |
| XP_032903214.1 | AGGRECAN/VERSICAN PROTEOGLYCAN |
| XP_032903215.1 | ACTIN |
| XP_032903216.1 | MUCIN-16 |
| XP_032903217.1 | |
| XP_032903218.1 | MYOSIN |
| XP_032903219.1 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
| XP_032903220.1 | RGS-GAIP INTERACTING PROTEIN GIPC |
