The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032903321.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903322.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903323.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903324.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032903325.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903326.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903327.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903328.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903329.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903330.1 | E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED |
| XP_032903331.1 | E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED |
| XP_032903332.1 | UPAR/LY6 DOMAIN-CONTAINING PROTEIN |
| XP_032903333.1 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
| XP_032903334.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903335.1 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
| XP_032903336.1 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
| XP_032903337.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903338.1 | G9A, ISOFORM B |
| XP_032903339.1 | OLFACTOMEDIN-RELATED |
| XP_032903340.1 | BUTYROPHILIN |
| XP_032903341.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903342.1 | BUTYROPHILIN |
| XP_032903343.1 | HISTONE H3.2 |
| XP_032903344.1 | BUTYROPHILIN |
| XP_032903345.1 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
| XP_032903346.1 | KINESIN-LIKE PROTEIN KLP-3 |
| XP_032903347.1 | |
| XP_032903348.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903349.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903350.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903351.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903352.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903353.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903354.1 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| XP_032903355.1 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| XP_032903356.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903357.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903358.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903359.1 | JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1 |
| XP_032903360.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903361.1 | BUTYROPHILIN |
| XP_032903362.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903363.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903364.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903365.1 | |
| XP_032903366.1 | JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1 |
| XP_032903367.1 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| XP_032903368.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903369.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903370.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
