The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032903271.1 | - |
| XP_032903272.1 | NG5 |
| XP_032903273.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903274.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903275.1 | CASEIN KINASE II SUBUNIT BETA |
| XP_032903276.1 | CASEIN KINASE II SUBUNIT BETA |
| XP_032903277.1 | CASEIN KINASE II SUBUNIT BETA |
| XP_032903278.1 | NG5 |
| XP_032903279.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903280.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903281.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903282.1 | CHIMERIN FAMILY MEMBER |
| XP_032903283.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903284.1 | FI14130P |
| XP_032903285.1 | CYTOCHROME P450 508A4-RELATED |
| XP_032903286.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903287.1 | HISTONE H2B |
| XP_032903288.1 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| XP_032903289.1 | CHIMERIN FAMILY MEMBER |
| XP_032903290.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903291.1 | |
| XP_032903292.1 | |
| XP_032903293.1 | SNRNP CORE PROTEIN FAMILY MEMBER |
| XP_032903294.1 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| XP_032903295.1 | COILED-COIL ALPHA-HELICAL ROD PROTEIN 1 |
| XP_032903296.1 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| XP_032903297.1 | COILED-COIL ALPHA-HELICAL ROD PROTEIN 1 |
| XP_032903298.1 | HEAT SHOCK PROTEIN 70KDA |
| XP_032903299.1 | HEAT SHOCK PROTEIN 70KDA |
| XP_032903300.1 | HEAT SHOCK PROTEIN 70KDA |
| XP_032903301.1 | HEAT SHOCK PROTEIN 70KDA |
| XP_032903302.1 | HEAT SHOCK PROTEIN 70KDA |
| XP_032903303.1 | SI:CH1073-475A24.1 |
| XP_032903304.1 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| XP_032903305.1 | SI:CH1073-475A24.1 |
| XP_032903306.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903307.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903308.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903309.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903310.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903311.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903312.1 | TFIIH, POLYPEPTIDE 4 |
| XP_032903313.1 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| XP_032903314.1 | TUBULIN |
| XP_032903315.1 | TRANSCRIPTION FACTOR 19 |
| XP_032903316.1 | TORSIN |
| XP_032903317.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903318.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903319.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032903320.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
