The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032902871.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032902872.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032902873.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032902874.1 | AGAP007712-PA |
| XP_032902875.1 | AGAP007712-PA |
| XP_032902876.1 | KELCH PROTEIN |
| XP_032902877.1 | PEROXISOMAL BIOGENESIS FACTOR 11 |
| XP_032902878.1 | PEROXISOMAL BIOGENESIS FACTOR 11 |
| XP_032902879.1 | BETA-1,4-GALACTOSYLTRANSFERASE |
| XP_032902880.1 | GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT |
| XP_032902881.1 | GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT |
| XP_032902882.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032902883.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032902884.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032902885.1 | TGF-BETA FAMILY |
| XP_032902886.1 | LEUCINE-RICH REPEAT CONTAINING PROTEIN 25 |
| XP_032902887.1 | CREB-REGULATED TRANSCRIPTION COACTIVATOR |
| XP_032902888.1 | CREB-REGULATED TRANSCRIPTION COACTIVATOR |
| XP_032902889.1 | CREB-REGULATED TRANSCRIPTION COACTIVATOR |
| XP_032902890.1 | LD33804P |
| XP_032902891.1 | LD33804P |
| XP_032902892.1 | THROMBOSPONDIN |
| XP_032902893.1 | THROMBOSPONDIN |
| XP_032902894.1 | DNA2/NAM7 HELICASE FAMILY |
| XP_032902895.1 | DNA2/NAM7 HELICASE FAMILY |
| XP_032902896.1 | HL07962P-RELATED |
| XP_032902897.1 | DNA2/NAM7 HELICASE FAMILY |
| XP_032902898.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| XP_032902899.1 | HOMER |
| XP_032902900.1 | HOMER |
| XP_032902901.1 | HOMER |
| XP_032902902.1 | UNCHARACTERIZED |
| XP_032902903.1 | UNCHARACTERIZED |
| XP_032902904.1 | UNCHARACTERIZED |
| XP_032902905.1 | DNA TOPOISOMERASE/GYRASE |
| XP_032902906.1 | UBIQUITIN |
| XP_032902907.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032902908.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032902909.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032902910.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032902911.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032902912.1 | S100 CALCIUM-BINDING PROTEIN |
| XP_032902913.1 | DNA TOPOISOMERASE/GYRASE |
| XP_032902914.1 | S100 CALCIUM-BINDING PROTEIN |
| XP_032902915.1 | SIN3B-RELATED |
| XP_032902916.1 | SIN3B-RELATED |
| XP_032902917.1 | SIN3B-RELATED |
| XP_032902918.1 | SIN3B-RELATED |
| XP_032902919.1 | SIN3B-RELATED |
| XP_032902920.1 | SIN3B-RELATED |
