About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_035021-T1MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED
LLU|FUN_035022-T1
LLU|FUN_035023-T1
LLU|FUN_035024-T1MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED
LLU|FUN_035025-T1RIBONUCLEASE H2 SUBUNIT B
LLU|FUN_035026-T1PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED
LLU|FUN_035027-T1
LLU|FUN_035028-T1
LLU|FUN_035029-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_035030-T1INTEGRAL TRANSMEMBRANE PROTEIN 2
LLU|FUN_035031-T1U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT
LLU|FUN_035032-T1
LLU|FUN_035033-T1UNCHARACTERIZED
LLU|FUN_035034-T1SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3
LLU|FUN_035035-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_035036-T1
LLU|FUN_035037-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_035038-T1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
LLU|FUN_035039-T1GUANYLYL CYCLASE
LLU|FUN_035040-T1
LLU|FUN_035041-T1GUANYLYL CYCLASE
LLU|FUN_035042-T1GUANYLYL CYCLASE
LLU|FUN_035043-T1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
LLU|FUN_035044-T1
LLU|FUN_035045-T1
LLU|FUN_035046-T1CONTACTIN 5
LLU|FUN_035047-T1
LLU|FUN_035049-T1
LLU|FUN_035050-T1
LLU|FUN_035051-T1
LLU|FUN_035052-T1ARRESTIN DOMAIN CONTAINING PROTEIN
LLU|FUN_035053-T1
LLU|FUN_035054-T1
LLU|FUN_035055-T1
LLU|FUN_035056-T1
LLU|FUN_035057-T1
LLU|FUN_035058-T1
LLU|FUN_035059-T1
LLU|FUN_035060-T1
LLU|FUN_035061-T1ZINC FINGER RNA-BINDING PROTEIN
LLU|FUN_035062-T1GLYCOSIDASE FAMILY 31
LLU|FUN_035063-T1UNCHARACTERIZED
LLU|FUN_035064-T1
LLU|FUN_035065-T1CST COMPLEX SUBUNIT CTC1
LLU|FUN_035066-T1
LLU|FUN_035067-T1RAS-LIKE FAMILY MEMBER 11
LLU|FUN_035068-T1THISBE
LLU|FUN_035069-T1FIBROUS SHEATH CABYR-BINDING PROTEIN
LLU|FUN_035070-T1
LLU|FUN_035071-T1
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