About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 684 685 686 687 688 689 690 691 692 693 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_037268-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_037269-T1TYROSINE-PROTEIN KINASE
OS493_037270-T1
OS493_037271-T1
OS493_037273-T1
OS493_037274-T1
OS493_037275-T1
OS493_037276-T1
OS493_037277-T1
OS493_037278-T1
OS493_037279-T1
OS493_037280-T1
OS493_037281-T1
OS493_037282-T1
OS493_037283-T1
OS493_037284-T1
OS493_037285-T1
OS493_037286-T1
OS493_037287-T1
OS493_037288-T1BATTENIN
OS493_037289-T1
OS493_037290-T1ADENOSYLHOMOCYSTEINASE
OS493_037291-T1NUCLEAR RESPIRATORY FACTOR 1
OS493_037292-T1UNCHARACTERIZED
OS493_037293-T1SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED
OS493_037294-T1BATTENIN
OS493_037295-T1JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE
OS493_037296-T1UNCHARACTERIZED
OS493_037297-T1HSC70-INTERACTING PROTEIN
OS493_037298-T1JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE
OS493_037299-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
OS493_037301-T1OPSIN
OS493_037302-T1CONTACTIN 5
OS493_037303-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_037304-T1SI:CH211-266K2.1
OS493_037305-T1LIPOYL SYNTHASE
OS493_037306-T1UNCHARACTERIZED
OS493_037307-T1INTELECTIN
OS493_037308-T1INTELECTIN
OS493_037309-T1CONTACTIN 5
OS493_037311-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
OS493_037312-T1
OS493_037313-T1
OS493_037314-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_037315-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_037316-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_037317-T1TRANSMEMBRANE PROTEIN 121B
OS493_037318-T1
OS493_037319-T1
OS493_037320-T1
TOP