About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_003285-T1
LLU|FUN_003286-T1
LLU|FUN_003287-T1PROTEIN SIDEKICK
LLU|FUN_003288-T1
LLU|FUN_003289-T1
LLU|FUN_003290-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
LLU|FUN_003291-T1
LLU|FUN_003292-T1ORGANIC ANION TRANSPORTER
LLU|FUN_003293-T1
LLU|FUN_003294-T1ORGANIC ANION TRANSPORTER
LLU|FUN_003295-T1RIBOSOMAL S SUBUNIT
LLU|FUN_003296-T1LD36006P
LLU|FUN_003297-T1LD36006P
LLU|FUN_003298-T1
LLU|FUN_003299-T1
LLU|FUN_003300-T1
LLU|FUN_003301-T1
LLU|FUN_003302-T1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
LLU|FUN_003303-T1
LLU|FUN_003304-T1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
LLU|FUN_003305-T1BCL2-ASSOCIATED ATHANOGENE
LLU|FUN_003306-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_003307-T1
LLU|FUN_003308-T1
LLU|FUN_003309-T1
LLU|FUN_003310-T1IQ DOMAIN-CONTAINING PROTEIN M
LLU|FUN_003311-T1MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED
LLU|FUN_003312-T1V-TYPE PROTON ATPASE SUBUNIT H
LLU|FUN_003313-T160S RIBOSOMAL PROTEIN L35A
LLU|FUN_003314-T1
LLU|FUN_003315-T1
LLU|FUN_003316-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_003317-T1
LLU|FUN_003318-T1-
LLU|FUN_003319-T1
LLU|FUN_003320-T1PHOSPHATIDYLINOSITOL SYNTHASE
LLU|FUN_003321-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_003322-T1
LLU|FUN_003323-T1PROTEASE M14 CARBOXYPEPTIDASE
LLU|FUN_003324-T1UNCHARACTERIZED
LLU|FUN_003325-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10
LLU|FUN_003326-T1ACETYLCHOLINESTERASE
LLU|FUN_003327-T1-
LLU|FUN_003328-T1
LLU|FUN_003330-T1
LLU|FUN_003331-T1AGAP005440-PA
LLU|FUN_003332-T1PLACENTAL PROTEIN 11-RELATED
LLU|FUN_003333-T1C-TYPE LECTIN SUPERFAMILY MEMBER
LLU|FUN_003334-T1
LLU|FUN_003335-T1
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