About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 1 2 3 4 5 6 7 8 9 10 Forward> Last>>        450 pages in total

Gene IDDescription
HS00251TRANSMEMBRANE PROTEIN 42
HS00252OXYSTEROL-BINDING PROTEIN-RELATED
HS00253EPM2A-INTERACTING PROTEIN 1
HS00254EPM2A-INTERACTING PROTEIN 1
HS00255DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT
HS00256TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
HS00257
HS00258
HS00259RNA BINDING PROTEIN
HS00260T-BOX PROTEIN-RELATED
HS00261
HS00262ANION EXCHANGE PROTEIN
HS00263HOMOCYSTEINE-RESPONSIVE ENDOPLASMIC RETICULUM-RESIDENT UNIQUITIN-LIKE DOMAIN HERPUD PROTEIN FAMILY MEMBER
HS00264ADHESION G-PROTEIN COUPLED RECEPTOR
HS00265FI01416P
HS00266HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
HS00267DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED
HS00268SERINE/THREONINE-PROTEIN KINASE DOA-RELATED
HS00269HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESS
HS00270LONGEVITY ASSURANCE FACTOR 1 LAG1
HS00271RNA BINDING PROTEIN
HS00272CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN
HS00273CIRCADIAN-ASSOCIATED TRANSCRIPTIONAL REPRESSOR
HS00274MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21
HS00275FATTY ACID BINDING PROTEIN
HS00276SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP
HS00277E3 UBIQUITIN-PROTEIN LIGASE PRAJA
HS00278HISTONE-LYSINE N-METHYLTRANSFERASE ASH1
HS00279LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71
HS0028040S RIBOSOMAL PROTEIN S27
HS00281SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
HS00282NEUROTRANSMITTER GATED ION CHANNEL
HS00283
HS00284SORTING NEXIN 17 AND 27
HS00285S100 CALCIUM-BINDING PROTEIN
HS00286S100 CALCIUM-BINDING PROTEIN
HS00287E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
HS00288DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 3
HS00289EPHRIN
HS00290EPHRIN
HS00291CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7
HS00292CELL CYCLE PROGRESSION PROTEIN 1
HS00293S100 CALCIUM-BINDING PROTEIN
HS00294S100 CALCIUM-BINDING PROTEIN
HS00295S100 CALCIUM-BINDING PROTEIN
HS00296HEAVYWEIGHT, ISOFORM A
HS00297PYGOPUS
HS00298CINGULIN-LIKE PROTEIN 1-RELATED
HS00299GDOWN1
HS00300NICE-3
TOP