About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 1 2 3 4 5 6 7 8 9 10 Forward> Last>>        450 pages in total

Gene IDDescription
HS00101ZINC FINGER MYM-TYPE PROTEIN
HS00102
HS00103RNA RECOGNITION MOTIF-CONTAINING
HS00104LYSOPHOSPHOLIPASE-RELATED
HS00105AD039 HT014 THIOREDOXIN FAMILY TRP26
HS00106TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3
HS00107LD33804P
HS00108
HS0010960S RIBOSOMAL PROTEIN L11-RELATED
HS00110TRANSLATION FACTOR
HS00111TRANSLATION FACTOR
HS00112SOLUTE CARRIER FAMILY 17
HS00113ASSOCIATE OF C-MYC AMY-1
HS00114REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS00115
HS00116CONNEXIN
HS00117CONNEXIN
HS00118
HS00119
HS00120SODIUM/HYDROGEN EXCHANGER
HS00121CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69
HS00122FLAVIN MONOAMINE OXIDASE
HS00123TEKTIN
HS00124DPY-19-LIKE 1, LIKE (H. SAPIENS)
HS00125UNCHARACTERIZED
HS00126CYCLINS
HS00127SRCR DOMAIN-CONTAINING PROTEIN
HS00128TGF-BETA FAMILY
HS00129POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
HS00130ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR
HS00131CHRONIC MYELOGENOUS LEUKEMIA TUMOR ANTIGEN 66
HS00132
HS00133THYROTROPIN-RELEASING HORMONE RECEPTOR
HS00134COLLAGEN ALPHA
HS00135TRANSMEMBRANE PROTEIN 74
HS00136
HS00137ENVOPLAKIN
HS00138HISTONE H2B
HS00139DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
HS00140F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
HS00141ENVOPLAKIN
HS00142OLIGORIBONUCLEASE, MITOCHONDRIAL
HS00143SOLUTE CARRIER FAMILY 52
HS00144SOLUTE CARRIER FAMILY 52
HS00145NFAT
HS00146PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
HS00147SAL-LIKE PROTEIN
HS00148MYELIN BASIC PROTEIN
HS00149AGAP004733-PA
HS00150SODIUM CHANNEL SUBUNIT BETA-1 AND 3
TOP