About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 1 2 3 4 5 6 7 8 9 10 Forward> Last>>        450 pages in total

Gene IDDescription
HS00201CLAUDIN
HS00202SIMILAR TO HYPOTHETICAL PROTEIN FLJ20508
HS00203AUSTRALIN, ISOFORM A-RELATED
HS00204REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS00205EPH RECEPTOR A5
HS00206PROLYL ENDOPEPTIDASE
HS00207EXPRESSED PROTEIN
HS00208PR DOMAIN ZINC FINGER PROTEIN
HS00209BETA/GAMMA CRYSTALLIN
HS00210ANNEXIN
HS00211MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30
HS00212ACETYLGLUCOSAMINYLTRANSFERASE
HS00213THIOPURINE S-METHYLTRANSFERASE
HS00214SYNDECAN
HS00215FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS00216STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10
HS00217ACETYLGLUCOSAMINYLTRANSFERASE
HS00218MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30
HS00219CATION EFFLUX PROTEIN/ ZINC TRANSPORTER
HS00220PROTEIN FAM167A
HS00221PROTEIN FAM167A
HS00222SCC1 / RAD21 FAMILY MEMBER
HS00223UNCHARACTERIZED
HS00224E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED
HS00225CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
HS00226G9A, ISOFORM B
HS00227ZINC FINGER PROTEIN
HS00228NEGATIVE ELONGATION FACTOR E
HS00229ATP-DEPENDENT RNA AND DNA HELICASE
HS00230NG5
HS00231TRANSMEMBRANE PROTEIN C9ORF91
HS00232SIALIDASE
HS00233BAT2 HLA-B-ASSOCIATED TRANSCRIPT 2
HS00234CASEIN KINASE II SUBUNIT BETA
HS00235
HS00236SPERM ACROSOME MEMBRANE-ASSOCIATED PROTEIN 4
HS00237
HS00238SPERM ACROSOME MEMBRANE-ASSOCIATED PROTEIN 4
HS00239SPERM ACROSOME MEMBRANE-ASSOCIATED PROTEIN 4
HS00240CHLORIDE INTRACELLULAR CHANNEL PROTEIN 6-RELATED
HS00241DIMETHYLARGININE DIMETHYLAMINOHYDROLASE
HS00242RIBOSOMAL PROTEIN S7
HS00243PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1
HS00244CARNITINE O-ACYLTRANSFERASE
HS00245TON-B BOX DOMAIN
HS00246NURIM
HS00247LIM DOMAIN-CONTAINING PROTEIN JUB
HS00248CUB DOMAIN-CONTAINING PROTEIN 1
HS00249EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
HS00250PALMITOYLTRANSFERASE ZDHHC16
TOP