About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 1 2 3 4 5 6 7 8 9 10 Forward> Last>>        450 pages in total

Gene IDDescription
HS00151NAD(P)H-HYDRATE EPIMERASE
HS00152LAMIN DM0-RELATED
HS00153FI24210P1
HS00154TEKTIN
HS00155FREE FATTY ACID RECEPTOR 2-RELATED
HS00156FREE FATTY ACID RECEPTOR 2-RELATED
HS00157EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
HS00158THIOESTERASE
HS00159SODIUM/HYDROGEN EXCHANGER
HS00160TRIACYLGLYCEROL LIPASE
HS00161APOLIPOPROTEIN
HS00162APOLIPOPROTEIN
HS00163MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40
HS00164
HS00165DEAD-BOX ATP-DEPENDENT RNA HELICASE 50
HS00166MITOCHONDRIAL DISTRIBUTION REGULATOR MISATO
HS00167RIBONUCLEOPROTEIN RB97D
HS00168XK-RELATED PROTEIN
HS00169XK-RELATED PROTEIN
HS00170EYES ABSENT
HS00171RIBOSOMAL PROTEIN S6 KINASE
HS00172
HS00173MYOSIN
HS00174CYCLIN DEPENDANT KINASE-5 ACTIVATOR
HS00175ENDOTHELIN
HS00176SCHNURRI, ISOFORM F
HS00177
HS00178UNCHARACTERIZED
HS00179CAS SCAFFOLDING PROTEIN
HS00180SMALL INTEGRAL MEMBRANE PROTEIN 13
HS00181N4BP1-RELATED
HS00182OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN
HS00183U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10
HS00184PROTEIN EVA-1 HOMOLOG B-RELATED
HS00185THRAP3/BCLAF1
HS00186MICROTUBULE-ASSOCIATED PROTEIN
HS00187UNCHARACTERIZED
HS00188PROTEIN STPG4
HS00189FOUR AND A HALF LIM DOMAINS PROTEIN
HS00190RAS-RELATED GTP BINDING RAG/GTR YEAST
HS00191PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1
HS00192ADENYLYL CYCLASE-ASSOCIATED PROTEIN
HS00193NEUROCHONDRIN
HS00194TRANSCRIPTION FACTOR AP-2
HS00195PROTEASOME SUBUNIT ALPHA/BETA
HS00196SORORIN
HS00197UPF0500 PROTEIN C1ORF216
HS00198PROTEIN CBG26694
HS00199CLASPIN
HS00200EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
TOP