The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS00051 | SPONDIN |
HS00052 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS00053 | NEUREXOPHILIN |
HS00054 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS00055 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
HS00056 | PHD FINGER PROTEINS |
HS00057 | AGAP011572-PA |
HS00058 | UBAP1-MVB12-ASSOCIATED (UMA)-DOMAIN CONTAINING PROTEIN 1 |
HS00059 | REPLICATION PROTEIN A3 |
HS00060 | COLLAGEN ALPHA |
HS00061 | BETA1,3-GALACTOSYLTRANSFERASE |
HS00062 | DC11 ACN9 HOMOLOG |
HS00063 | TACHYKININ |
HS00064 | ASPARAGINE SYNTHETASE |
HS00065 | NUCLEAR HORMONE RECEPTOR |
HS00066 | |
HS00067 | |
HS00068 | COLLAGEN ALPHA |
HS00069 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
HS00070 | FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS |
HS00071 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
HS00072 | TAPASIN |
HS00073 | DEATH DOMAIN-ASSOCIATED PROTEIN 6 DAXX |
HS00074 | SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER |
HS00075 | AGAP004733-PA |
HS00076 | KINESIN-LIKE PROTEIN KLP-3 |
HS00077 | PR DOMAIN ZINC FINGER PROTEIN |
HS00078 | |
HS00079 | TRANSCRIPTION FACTOR 19 |
HS00080 | NECTIN-2 |
HS00081 | PROTEIN CBG26694 |
HS00082 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
HS00083 | |
HS00084 | POU DOMAIN |
HS00085 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS00086 | ETS |
HS00087 | |
HS00088 | |
HS00089 | HMG-BOX TRANSCRIPTION FACTOR BBX |
HS00090 | HMG-BOX TRANSCRIPTION FACTOR BBX |
HS00091 | GLYCOGEN SYNTHASE KINASE-3 ALPHA |
HS00092 | |
HS00093 | |
HS00094 | TGF-BETA FAMILY |
HS00095 | ENVOPLAKIN |
HS00096 | NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 5 |
HS00097 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
HS00098 | NUCLEOTIDE KINASE |
HS00099 | LITHOSTATHINE |
HS00100 | ZINC FINGER MYM-TYPE PROTEIN |