Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00295010 | MULTIVESICULAR BODY SUBUNIT 12A |
| SKAU_T00295020 | CATION-TRANSPORTING ATPASE-RELATED |
| SKAU_T00295030 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 5 |
| SKAU_T00295040 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00295050 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00295060 | POL PROTEIN |
| SKAU_T00295070 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| SKAU_T00295080 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00295090 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00295100 | |
| SKAU_T00295110 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| SKAU_T00295120 | IP01015P-RELATED |
| SKAU_T00295130 | |
| SKAU_T00295140 | |
| SKAU_T00295150 | 6-PHOSPHOGLUCONOLACTONASE |
| SKAU_T00295160 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| SKAU_T00295170 | SPERMATHECAL PHYSIOLOGY VARIANT |
| SKAU_T00295180 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| SKAU_T00295190 | TUBULIN |
| SKAU_T00295200 | |
| SKAU_T00295210 | ANTI-SILENCING PROTEIN 1 |
| SKAU_T00295220 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| SKAU_T00295230 | |
| SKAU_T00295240 | POLYCOMB GROUP PROTEIN |
| SKAU_T00295250 | NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT |
| SKAU_T00295260 | RGS-GAIP INTERACTING PROTEIN GIPC |
| SKAU_T00295270 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00295280 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| SKAU_T00295290 | QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 |
| SKAU_T00295300 | DYNAMIN |
| SKAU_T00295310 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00295320 | |
| SKAU_T00295330 | |
| SKAU_T00295340 | |
| SKAU_T00295350 | |
| SKAU_T00295360 | |
| SKAU_T00295370 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| SKAU_T00295380 | |
| SKAU_T00295390 | |
| SKAU_T00295400 | |
| SKAU_T00295410 | |
| SKAU_T00295420 | |
| SKAU_T00295430 | |
| SKAU_T00295440 | LIPID PHOSPHATE PHOSPHATASE |
| SKAU_T00295450 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| SKAU_T00295460 | |
| SKAU_T00295470 | |
| SKAU_T00295480 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00295490 | OLFACTOMEDIN-RELATED |
| SKAU_T00295500 |
