Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00296510 | TYPE I INTERFERON |
| SKAU_T00296520 | TYPE I INTERFERON |
| SKAU_T00296530 | TYPE I INTERFERON |
| SKAU_T00296540 | TYPE I INTERFERON |
| SKAU_T00296550 | TYPE I INTERFERON |
| SKAU_T00296560 | TYPE I INTERFERON |
| SKAU_T00296570 | TYPE I INTERFERON |
| SKAU_T00296580 | TYPE I INTERFERON |
| SKAU_T00296590 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| SKAU_T00296600 | |
| SKAU_T00296610 | |
| SKAU_T00296620 | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED |
| SKAU_T00296630 | |
| SKAU_T00296640 | |
| SKAU_T00296650 | |
| SKAU_T00296660 | |
| SKAU_T00296670 | |
| SKAU_T00296680 | ROLLING PEBBLES, ISOFORM B |
| SKAU_T00296690 | |
| SKAU_T00296700 | |
| SKAU_T00296710 | HISTONE DEACETYLASE 9-RELATED |
| SKAU_T00296720 | LSM12 HOMOLOG |
| SKAU_T00296730 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| SKAU_T00296740 | N-ACETYLGLUTAMATE SYNTHASE |
| SKAU_T00296750 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00296760 | |
| SKAU_T00296770 | |
| SKAU_T00296780 | |
| SKAU_T00296790 | |
| SKAU_T00296800 | |
| SKAU_T00296810 | ORMDL PROTEINS |
| SKAU_T00296820 | |
| SKAU_T00296830 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| SKAU_T00296840 | SECRETED MODULAR CALCIUM-BINDING PROTEIN |
| SKAU_T00296850 | |
| SKAU_T00296860 | |
| SKAU_T00296870 | |
| SKAU_T00296880 | WNT RELATED |
| SKAU_T00296890 | VESICULAR-FUSION PROTEIN NSF |
| SKAU_T00296900 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| SKAU_T00296910 | CYCLIN DEPENDANT KINASE-5 ACTIVATOR |
| SKAU_T00296920 | |
| SKAU_T00296930 | |
| SKAU_T00296940 | |
| SKAU_T00296950 | DNA HELICASE RECQ FAMILY MEMBER |
| SKAU_T00296960 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00296970 | HISTONE H3 |
| SKAU_T00296980 | PDZ DOMAIN CONTAINING PROTEIN |
| SKAU_T00296990 | - |
| SKAU_T00297000 | TRANSMEMBRANE ANCHOR PROTEIN 1 |
