Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00294010 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| SKAU_T00294020 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| SKAU_T00294030 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| SKAU_T00294040 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| SKAU_T00294050 | |
| SKAU_T00294060 | ZONA PELLUCIDA SPERM-BINDING PROTEIN |
| SKAU_T00294070 | ZONA PELLUCIDA SPERM-BINDING PROTEIN |
| SKAU_T00294080 | CENTROMERE PROTEIN M |
| SKAU_T00294090 | RNA AND EXPORT FACTOR BINDING PROTEIN |
| SKAU_T00294100 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00294110 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00294120 | |
| SKAU_T00294130 | RNA-BINDING PROTEIN LUC7-RELATED |
| SKAU_T00294140 | - |
| SKAU_T00294150 | ESSENTIAL MCU REGULATOR, MITOCHONDRIAL |
| SKAU_T00294160 | NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT |
| SKAU_T00294170 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
| SKAU_T00294180 | |
| SKAU_T00294190 | |
| SKAU_T00294200 | NUCLEOLAR PROTEIN 12 |
| SKAU_T00294210 | STEROL REGULATORY ELEMENT-BINDING PROTEIN |
| SKAU_T00294220 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00294230 | UNCHARACTERIZED |
| SKAU_T00294240 | |
| SKAU_T00294250 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00294260 | |
| SKAU_T00294270 | UNCHARACTERIZED |
| SKAU_T00294280 | BCL2 INTERACTING MEDIATOR OF CELL DEATH |
| SKAU_T00294290 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| SKAU_T00294300 | UNCHARACTERIZED |
| SKAU_T00294310 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00294320 | ER LUMEN PROTEIN RETAINING RECEPTOR |
| SKAU_T00294330 | INWARD RECTIFIER POTASSIUM CHANNEL |
| SKAU_T00294340 | SOX100B |
| SKAU_T00294350 | DNA-DIRECTED RNA POLYMERASE SUBUNIT K |
| SKAU_T00294360 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| SKAU_T00294370 | GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN |
| SKAU_T00294380 | ATP-DEPENDENT RNA HELICASE DBP3 |
| SKAU_T00294390 | CBL |
| SKAU_T00294400 | UROPLAKIN II |
| SKAU_T00294410 | FORKHEAD BOX PROTEIN R1 |
| SKAU_T00294420 | COILED-COIL DOMAIN-CONTAINING PROTEIN 84 |
| SKAU_T00294430 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00294440 | |
| SKAU_T00294450 | |
| SKAU_T00294460 | CHROMOBOX PROTEIN |
| SKAU_T00294470 | NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR |
| SKAU_T00294480 | ZETA-COAT PROTEIN |
| SKAU_T00294490 | BEN DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00294500 | BEN DOMAIN-CONTAINING PROTEIN 6 |
