Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00291510 | |
| SKAU_T00291520 | |
| SKAU_T00291530 | |
| SKAU_T00291540 | |
| SKAU_T00291550 | |
| SKAU_T00291560 | |
| SKAU_T00291570 | TRANSCRIPTION INITIATION FACTOR IA RRN3 |
| SKAU_T00291580 | SI:CH211-232M10.4-RELATED |
| SKAU_T00291590 | TRANSLATION FACTOR |
| SKAU_T00291600 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| SKAU_T00291610 | |
| SKAU_T00291620 | NUCLEAR DISTRIBUTION PROTEIN NUDE HOMOLOG 1 |
| SKAU_T00291630 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| SKAU_T00291640 | ATP-BINDING CASSETTE SUB-FAMILY C |
| SKAU_T00291650 | ATP-BINDING CASSETTE SUB-FAMILY C |
| SKAU_T00291660 | ATP-BINDING CASSETTE SUB-FAMILY C |
| SKAU_T00291670 | |
| SKAU_T00291680 | COENZYME Q10 BIOSYNTHESIS PROTEIN 7 |
| SKAU_T00291690 | |
| SKAU_T00291700 | ADP-RIBOSYLATION-LIKE FACTOR 6-INTERACTING PROTEIN |
| SKAU_T00291710 | 40S RIBOSOMAL PROTEIN S15A |
| SKAU_T00291720 | MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00291730 | LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR |
| SKAU_T00291740 | U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN |
| SKAU_T00291750 | DNA-DIRECTED RNA POLYMERASE |
| SKAU_T00291760 | LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR |
| SKAU_T00291770 | |
| SKAU_T00291780 | UBA-LIKE DOMAIN-CONTAINING PROTEIN 2 |
| SKAU_T00291790 | FORKHEAD BOX PROTEIN J1 |
| SKAU_T00291800 | VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 |
| SKAU_T00291810 | SH3 MULTIPLE DOMAIN |
| SKAU_T00291820 | TRANSDUCIN BETA-LIKE 3 |
| SKAU_T00291830 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00291840 | AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN |
| SKAU_T00291850 | PARVALBUMIN ALPHA |
| SKAU_T00291860 | PARVALBUMIN ALPHA |
| SKAU_T00291870 | PARVALBUMIN ALPHA |
| SKAU_T00291880 | SERINE/THREONINE-PROTEIN KINASE LMTK1 |
| SKAU_T00291890 | BRAIN PROTEIN I3 |
| SKAU_T00291900 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
| SKAU_T00291910 | PENTRAXIN |
| SKAU_T00291920 | |
| SKAU_T00291930 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
| SKAU_T00291940 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
| SKAU_T00291950 | |
| SKAU_T00291960 | |
| SKAU_T00291970 | |
| SKAU_T00291980 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| SKAU_T00291990 | |
| SKAU_T00292000 | STEROL REGULATORY ELEMENT-BINDING PROTEIN |
