Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00288510 | |
| SKAU_T00288520 | |
| SKAU_T00288530 | |
| SKAU_T00288540 | HEPARAN SULFATE SULFOTRANSFERASE |
| SKAU_T00288550 | |
| SKAU_T00288560 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00288570 | |
| SKAU_T00288580 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| SKAU_T00288590 | NON-SMC ELEMENT 1-RELATED |
| SKAU_T00288600 | CYTOKINE RECEPTOR |
| SKAU_T00288610 | ET TRANSLATION PRODUCT-RELATED |
| SKAU_T00288620 | UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1 |
| SKAU_T00288630 | STEREOCILIN RELATED |
| SKAU_T00288640 | RECQ-MEDIATED GENOME INSTABILITY PROTEIN 2 RMI2 |
| SKAU_T00288650 | LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR |
| SKAU_T00288660 | STANNIN |
| SKAU_T00288670 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 |
| SKAU_T00288680 | PHOSPHOLIPASE A2 FAMILY MEMBER |
| SKAU_T00288690 | |
| SKAU_T00288700 | |
| SKAU_T00288710 | |
| SKAU_T00288720 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00288730 | |
| SKAU_T00288740 | |
| SKAU_T00288750 | LEISHMANOLYSIN-LIKE PEPTIDASE |
| SKAU_T00288760 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| SKAU_T00288770 | |
| SKAU_T00288780 | MATRIX METALLOPROTEINASE |
| SKAU_T00288790 | 39S RIBOSOMAL PROTEIN L52, MITOCHONDRIAL |
| SKAU_T00288800 | LIM DOMAIN-CONTAINING PROTEIN JUB |
| SKAU_T00288810 | APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS |
| SKAU_T00288820 | APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS |
| SKAU_T00288830 | CAS SCAFFOLDING PROTEIN |
| SKAU_T00288840 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00288850 | |
| SKAU_T00288860 | |
| SKAU_T00288870 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| SKAU_T00288880 | PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENT |
| SKAU_T00288890 | PEPTIDYLPROLYL ISOMERASE |
| SKAU_T00288900 | 5'-NUCLEOTIDASE |
| SKAU_T00288910 | LD33804P |
| SKAU_T00288920 | KELCH PROTEIN |
| SKAU_T00288930 | ATP-CITRATE SYNTHASE |
| SKAU_T00288940 | 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE |
| SKAU_T00288950 | DNAJ HOMOLOG SUBFAMILY C MEMBER 7 |
| SKAU_T00288960 | |
| SKAU_T00288970 | DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN |
| SKAU_T00288980 | HELICASE WITH DEATH DOMAIN-RELATED |
| SKAU_T00288990 | - |
| SKAU_T00289000 | MULTICOPPER OXIDASE-RELATED |
