Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00287510 | PHOSPHATIDYLINOSITOL TRANSFER PROTEIN |
| SKAU_T00287520 | PROTEIN YIPPEE-LIKE CG15309-RELATED |
| SKAU_T00287530 | PHOSPHATIDYLGLYCEROL PHOSPHOLIPASE C |
| SKAU_T00287540 | MITOGEN-ACTIVATED PROTEIN KINASE |
| SKAU_T00287550 | NUDIX HYDROLASE |
| SKAU_T00287560 | CALCIUM-BINDING PROTEIN 1-RELATED |
| SKAU_T00287570 | ASPARTATE BETA-HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2 |
| SKAU_T00287580 | PROTEIN CBR-CLEC-78 |
| SKAU_T00287590 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
| SKAU_T00287600 | HIRA-INTERACTING PROTEIN 3 |
| SKAU_T00287610 | TRANSMEMBRANE PROTEASE SERINE |
| SKAU_T00287620 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
| SKAU_T00287630 | LD33804P |
| SKAU_T00287640 | KELCH PROTEIN |
| SKAU_T00287650 | PR DOMAIN ZINC FINGER PROTEIN |
| SKAU_T00287660 | MITOGEN-ACTIVATED PROTEIN KINASE |
| SKAU_T00287670 | CT120 PROTEIN |
| SKAU_T00287680 | CT120 PROTEIN |
| SKAU_T00287690 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00287700 | MAJOR VAULT PROTEIN |
| SKAU_T00287710 | NG5 |
| SKAU_T00287720 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| SKAU_T00287730 | |
| SKAU_T00287740 | |
| SKAU_T00287750 | REVERSE TRANSCRIPTASES |
| SKAU_T00287760 | RABPHILIN, ISOFORM A |
| SKAU_T00287770 | LD33804P |
| SKAU_T00287780 | |
| SKAU_T00287790 | |
| SKAU_T00287800 | ELONGATION FACTOR TU-RELATED |
| SKAU_T00287810 | SERINE/THREONINE PROTEIN PHOSPHATASE |
| SKAU_T00287820 | CLAUDIN |
| SKAU_T00287830 | CORONIN |
| SKAU_T00287840 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
| SKAU_T00287850 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00287860 | PERFORIN-1 |
| SKAU_T00287870 | |
| SKAU_T00287880 | |
| SKAU_T00287890 | CYTOCHROME C OXIDASE POLYPEPTIDE VIA |
| SKAU_T00287900 | ARMC5 ARMADILLO REPEAT-CONTAINING -RELATED |
| SKAU_T00287910 | |
| SKAU_T00287920 | UNCHARACTERIZED |
| SKAU_T00287930 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 |
| SKAU_T00287940 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00287950 | RUS1 FAMILY PROTEIN C16ORF58 |
| SKAU_T00287960 | |
| SKAU_T00287970 | EMO2-RELATED |
| SKAU_T00287980 | PROTEIN LIN1 |
| SKAU_T00287990 | PROTEIN CBG26694 |
| SKAU_T00288000 | PROTEIN CBG26694 |
