Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00285510 | ANNEXIN |
| SKAU_T00285520 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| SKAU_T00285530 | UNCHARACTERIZED |
| SKAU_T00285540 | RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE |
| SKAU_T00285550 | BNIP - RELATED |
| SKAU_T00285560 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| SKAU_T00285570 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| SKAU_T00285580 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00285590 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
| SKAU_T00285600 | F-BOX/TPR REPEAT PROTEIN POF3 |
| SKAU_T00285610 | - |
| SKAU_T00285620 | SORTING NEXIN-22 AND 24 |
| SKAU_T00285630 | SIGMA 1-TYPE OPIOID RECEPTOR-RELATED |
| SKAU_T00285640 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
| SKAU_T00285650 | CYTOKINE RECEPTOR |
| SKAU_T00285660 | CYTOKINE RECEPTOR |
| SKAU_T00285670 | |
| SKAU_T00285680 | CYSTATIN |
| SKAU_T00285690 | RASSF |
| SKAU_T00285700 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00285710 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00285720 | |
| SKAU_T00285730 | RETROTRANSPOSON |
| SKAU_T00285740 | EPH RECEPTOR A5 |
| SKAU_T00285750 | EPH RECEPTOR A5 |
| SKAU_T00285760 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00285770 | |
| SKAU_T00285780 | |
| SKAU_T00285790 | |
| SKAU_T00285800 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00285810 | LIPID PHOSPHATE PHOSPHATASE |
| SKAU_T00285820 | PARALEMMIN-RELATED |
| SKAU_T00285830 | PARALEMMIN-RELATED |
| SKAU_T00285840 | ZGC:174356 |
| SKAU_T00285850 | SORTING NEXIN-4 |
| SKAU_T00285860 | SOSS COMPLEX SUBUNIT C |
| SKAU_T00285870 | SIMILAR TO RIKEN CDNA E130308A19 |
| SKAU_T00285880 | COILED-COIL DOMAIN-CONTAINING PROTEIN 106 |
| SKAU_T00285890 | HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2 |
| SKAU_T00285900 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| SKAU_T00285910 | |
| SKAU_T00285920 | |
| SKAU_T00285930 | CERAMIDE GLUCOSYLTRANSFERASE |
| SKAU_T00285940 | DNAJ HOMOLOG SUBFAMILY C MEMBER 25 |
| SKAU_T00285950 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
| SKAU_T00285960 | ATP SYNTHASE F CHAIN, MITOCHONDRIAL-RELATED |
| SKAU_T00285970 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATED |
| SKAU_T00285980 | |
| SKAU_T00285990 | RP42 RELATED |
| SKAU_T00286000 |
