Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00292010 | |
| SKAU_T00292020 | VHS DOMAIN CONTAINING PROTEIN FAMILY |
| SKAU_T00292030 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
| SKAU_T00292040 | SEROTONIN N-ACETYLTRANSFERASE |
| SKAU_T00292050 | SEROTONIN N-ACETYLTRANSFERASE |
| SKAU_T00292060 | INACTIVE RHOMBOID PROTEIN |
| SKAU_T00292070 | |
| SKAU_T00292080 | DNA-3-METHYLADENINE GLYCOSYLASE |
| SKAU_T00292090 | CGTHBA PROTEIN -14 GENE PROTEIN |
| SKAU_T00292100 | HEMOGLOBIN FAMILY MEMBER |
| SKAU_T00292110 | HEMOGLOBIN FAMILY MEMBER |
| SKAU_T00292120 | HEMOGLOBIN FAMILY MEMBER |
| SKAU_T00292130 | HEMOGLOBIN FAMILY MEMBER |
| SKAU_T00292140 | HEMOGLOBIN FAMILY MEMBER |
| SKAU_T00292150 | HEMOGLOBIN FAMILY MEMBER |
| SKAU_T00292160 | HEMOGLOBIN FAMILY MEMBER |
| SKAU_T00292170 | AQUAPORIN TRANSPORTER |
| SKAU_T00292180 | AQUAPORIN-8 |
| SKAU_T00292190 | 3BP-1 RELATED RHOGAP |
| SKAU_T00292200 | FORMIN HOMOLOGY 2 FAMILY MEMBER |
| SKAU_T00292210 | FORMIN HOMOLOGY 2 FAMILY MEMBER |
| SKAU_T00292220 | |
| SKAU_T00292230 | FORMIN HOMOLOGY 2 FAMILY MEMBER |
| SKAU_T00292240 | UNCHARACTERIZED |
| SKAU_T00292250 | UNCHARACTERIZED |
| SKAU_T00292260 | BETA LACTAMASE DOMAIN |
| SKAU_T00292270 | BETA LACTAMASE DOMAIN |
| SKAU_T00292280 | ACYLPYRUVASE |
| SKAU_T00292290 | METHIONINE-R-SULFOXIDE REDUCTASE B1 |
| SKAU_T00292300 | TEX2 PROTEIN-RELATED |
| SKAU_T00292310 | 60S RIBOSOMAL PROTEIN L3-RELATED |
| SKAU_T00292320 | NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT |
| SKAU_T00292330 | RIBOSOMAL S SUBUNIT |
| SKAU_T00292340 | ACYL CARRIER PROTEIN |
| SKAU_T00292350 | TRINUCLEOTIDE REPEAT-CONTAINING GENE 6 |
| SKAU_T00292360 | RETINOBLASTOMA-BINDING PROTEIN 6 |
| SKAU_T00292370 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| SKAU_T00292380 | |
| SKAU_T00292390 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| SKAU_T00292400 | RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00292410 | |
| SKAU_T00292420 | |
| SKAU_T00292430 | |
| SKAU_T00292440 | |
| SKAU_T00292450 | PROTEIN KINASE C, MU |
| SKAU_T00292460 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| SKAU_T00292470 | UNCHARACTERIZED |
| SKAU_T00292480 | MHC CLASS II TRANSACTIVATOR |
| SKAU_T00292490 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
| SKAU_T00292500 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
