About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1219.7082FASCIN
mRNA.BJAM.scaffold1219.7083
mRNA.BJAM.scaffold12192.22154ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold12192.22155ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold12193.22156CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR
mRNA.BJAM.scaffold12197.22157
mRNA.BJAM.scaffold12197.22158
mRNA.BJAM.scaffold12199.22159GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
mRNA.BJAM.scaffold122.971L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))
mRNA.BJAM.scaffold122.972SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN
mRNA.BJAM.scaffold122.973ELONGATOR COMPLEX PROTEIN 1
mRNA.BJAM.scaffold12200.22160
mRNA.BJAM.scaffold12205.22161
mRNA.BJAM.scaffold1221.7084PROTEIN CDV3 HOMOLOG
mRNA.BJAM.scaffold1221.7085
mRNA.BJAM.scaffold1221.7086
mRNA.BJAM.scaffold1221.7087CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE
mRNA.BJAM.scaffold1221.7088
mRNA.BJAM.scaffold1221.7089POLY A POLYMERASE
mRNA.BJAM.scaffold12212.22162
mRNA.BJAM.scaffold12212.22163PROTEIN SIDEKICK
mRNA.BJAM.scaffold12213.22164RING ZINC FINGER PROTEIN
mRNA.BJAM.scaffold12215.22165
mRNA.BJAM.scaffold12216.22166
mRNA.BJAM.scaffold1222.7090
mRNA.BJAM.scaffold1222.7091TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold1222.7092TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold1222.7093CYPHER, ISOFORM B
mRNA.BJAM.scaffold1222.7094CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.scaffold1222.7095
mRNA.BJAM.scaffold1222.7096CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.scaffold1222.7097WD REPEAT-CONTAINING PROTEIN 17
mRNA.BJAM.scaffold1222.7098WD REPEAT-CONTAINING PROTEIN 17
mRNA.BJAM.scaffold1222.7099RBP-RELATED
mRNA.BJAM.scaffold1222.7100RBP-RELATED
mRNA.BJAM.scaffold1222.7101RBP-RELATED
mRNA.BJAM.scaffold1222.7102
mRNA.BJAM.scaffold1222.7103
mRNA.BJAM.scaffold1222.7104HISTONE H3
mRNA.BJAM.scaffold12221.22167
mRNA.BJAM.scaffold12223.22168UNCHARACTERIZED
mRNA.BJAM.scaffold12227.22169PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1
mRNA.BJAM.scaffold12228.22170TRNA (URACIL-5-)-METHYLTRANSFERASE
mRNA.BJAM.scaffold12228.22171CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1
mRNA.BJAM.scaffold12228.22172CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1
mRNA.BJAM.scaffold12228.22173TRNA (URACIL-5-)-METHYLTRANSFERASE
mRNA.BJAM.scaffold12228.22174
mRNA.BJAM.scaffold1223.7105LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
mRNA.BJAM.scaffold1223.7107HOMEOBOX PROTEIN ARISTALESS
mRNA.BJAM.scaffold1223.7108HOMEOBOX PROTEIN ARISTALESS
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