About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold11976.22017
mRNA.BJAM.scaffold11980.22018-
mRNA.BJAM.scaffold11980.22019
mRNA.BJAM.scaffold11980.22020ACROSIN-RELATED
mRNA.BJAM.scaffold11980.22021
mRNA.BJAM.scaffold11980.22022ACROSIN-RELATED
mRNA.BJAM.scaffold11980.22023
mRNA.BJAM.scaffold11984.22025HEAT SHOCK PROTEIN 90 FAMILY MEMBER
mRNA.BJAM.scaffold11984.22026
mRNA.BJAM.scaffold11984.22027
mRNA.BJAM.scaffold11984.22029MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS
mRNA.BJAM.scaffold11985.22030
mRNA.BJAM.scaffold11985.22031SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold11985.22032HEAT SHOCK PROTEIN HSP-12.2-RELATED
mRNA.BJAM.scaffold11986.22033UNCHARACTERIZED
mRNA.BJAM.scaffold11987.22034AQUAPORIN TRANSPORTER
mRNA.BJAM.scaffold11987.22035AQUAPORIN TRANSPORTER
mRNA.BJAM.scaffold11992.22038
mRNA.BJAM.scaffold11996.22039
mRNA.BJAM.scaffold11996.22040
mRNA.BJAM.scaffold11996.22043
mRNA.BJAM.scaffold11996.22044ACYL-COA DEHYDROGENASE
mRNA.BJAM.scaffold11996.22045NADH-CYTOCHROME B5 REDUCTASE
mRNA.BJAM.scaffold12.69HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER
mRNA.BJAM.scaffold12.70
mRNA.BJAM.scaffold12.71-
mRNA.BJAM.scaffold12.72NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED
mRNA.BJAM.scaffold12.73NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED
mRNA.BJAM.scaffold12.74
mRNA.BJAM.scaffold12.75NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED
mRNA.BJAM.scaffold12.76AMINOMETHYLTRANSFERASE
mRNA.BJAM.scaffold12.77AMINOMETHYLTRANSFERASE
mRNA.BJAM.scaffold12.78
mRNA.BJAM.scaffold12.79
mRNA.BJAM.scaffold12.80MYOTONIC DYSTROPHY S/T KINASE-RELATED
mRNA.BJAM.scaffold12.81MYOTONIC DYSTROPHY S/T KINASE-RELATED
mRNA.BJAM.scaffold12.82SOLUTE CARRIER FAMILY 22 MEMBER
mRNA.BJAM.scaffold12.83AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED
mRNA.BJAM.scaffold12.84MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S27
mRNA.BJAM.scaffold120.961
mRNA.BJAM.scaffold1200.69885-HYDROXYTRYPTAMINE RECEPTOR
mRNA.BJAM.scaffold1200.6989
mRNA.BJAM.scaffold12000.22046
mRNA.BJAM.scaffold12004.22048LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold12005.22049RNA HELICASE
mRNA.BJAM.scaffold12005.22050VESICULAR MANNOSE-BINDING LECTIN
mRNA.BJAM.scaffold1201.6990FIBROSIN FAMILY MEMBER
mRNA.BJAM.scaffold12014.22051CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.scaffold12014.22052CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.scaffold12016.22053
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