About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1176.6905MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold1176.6906
mRNA.BJAM.scaffold1176.6907MACROGLOBULIN / COMPLEMENT
mRNA.BJAM.scaffold1176.6908
mRNA.BJAM.scaffold1177.6909DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold1177.6910
mRNA.BJAM.scaffold11771.21928UNCHARACTERIZED
mRNA.BJAM.scaffold11772.21929
mRNA.BJAM.scaffold11777.21930
mRNA.BJAM.scaffold11777.21931
mRNA.BJAM.scaffold11779.21932NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
mRNA.BJAM.scaffold1178.6911SAND PROTEIN-RELATED
mRNA.BJAM.scaffold1178.6912SAND PROTEIN-RELATED
mRNA.BJAM.scaffold1178.6913
mRNA.BJAM.scaffold1178.6914NEGATIVE ELONGATION FACTOR E
mRNA.BJAM.scaffold1178.69153-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED
mRNA.BJAM.scaffold1178.6916F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA
mRNA.BJAM.scaffold1178.6917RHO FAMILY GTPASE
mRNA.BJAM.scaffold1178.6918UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN
mRNA.BJAM.scaffold1178.6919UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN
mRNA.BJAM.scaffold1178.6920RHO FAMILY GTPASE
mRNA.BJAM.scaffold1178.6921
mRNA.BJAM.scaffold1178.6922EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
mRNA.BJAM.scaffold11788.21933CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold11788.21934CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold11788.21935CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1179.6923N-TERMINAL ASPARAGINE AMIDOHYDROLASE
mRNA.BJAM.scaffold1179.6924MICROTUBULE-ASSOCIATED PROTEIN
mRNA.BJAM.scaffold1179.6925IP19862P
mRNA.BJAM.scaffold1179.69263-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold11791.21936SHORT STATURE HOMEOBOX
mRNA.BJAM.scaffold11793.21937UBIQUITIN-CONJUGATING ENZYME E2
mRNA.BJAM.scaffold11794.21938BEIGE/BEACH-RELATED
mRNA.BJAM.scaffold11796.21939
mRNA.BJAM.scaffold11796.21940ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY
mRNA.BJAM.scaffold11796.21941PROTEIN-LYSINE N-METHYLTRANSFERASE METTL10
mRNA.BJAM.scaffold11797.21942MATRIX METALLOPROTEINASE
mRNA.BJAM.scaffold118.931PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
mRNA.BJAM.scaffold118.932
mRNA.BJAM.scaffold118.933
mRNA.BJAM.scaffold118.934PROTEIN SIDEKICK
mRNA.BJAM.scaffold118.935
mRNA.BJAM.scaffold118.936
mRNA.BJAM.scaffold118.937PEPTIDE METHIONINE SULFOXIDE REDUCTASE
mRNA.BJAM.scaffold118.938
mRNA.BJAM.scaffold118.939NUCLEOPORIN NUP188 HOMOLOG
mRNA.BJAM.scaffold118.940CHLORIDE CHANNEL PROTEIN
mRNA.BJAM.scaffold118.941CHLORIDE CHANNEL PROTEIN
mRNA.BJAM.scaffold118.942ZINC FINGER PROTEIN
mRNA.BJAM.scaffold118.943MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20
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