About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1154.6754-
mRNA.BJAM.scaffold1154.6755HISTIDINE TRIAD HIT PROTEIN
mRNA.BJAM.scaffold1154.6756PROLINE OXIDASE
mRNA.BJAM.scaffold1154.6757PROLINE OXIDASE
mRNA.BJAM.scaffold1154.6758STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL
mRNA.BJAM.scaffold1154.6759MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
mRNA.BJAM.scaffold1154.6760MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
mRNA.BJAM.scaffold1154.6761MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
mRNA.BJAM.scaffold1154.6762
mRNA.BJAM.scaffold1154.6763GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEINS-INTERACTING PROTEIN 1 GADD45GIP1
mRNA.BJAM.scaffold11541.21828SOLUTE CARRIER FAMILY 17
mRNA.BJAM.scaffold11543.21829ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold11543.21830ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold1155.6764
mRNA.BJAM.scaffold11550.21831
mRNA.BJAM.scaffold11551.21832AGAP011572-PA
mRNA.BJAM.scaffold11557.21833ARP2/3 COMPLEX 21 KD SUBUNIT
mRNA.BJAM.scaffold11557.21834ARP2/3 COMPLEX 21 KD SUBUNIT
mRNA.BJAM.scaffold1156.6765
mRNA.BJAM.scaffold1156.6766
mRNA.BJAM.scaffold1156.6767TRANSMEMBRANE PROTEASE SERINE
mRNA.BJAM.scaffold11560.21835
mRNA.BJAM.scaffold11561.21837TRIACYLGLYCEROL LIPASE
mRNA.BJAM.scaffold11566.21838
mRNA.BJAM.scaffold11568.21839UNCHARACTERIZED
mRNA.BJAM.scaffold1157.6768
mRNA.BJAM.scaffold1157.6769
mRNA.BJAM.scaffold1157.6770ZGC:174356
mRNA.BJAM.scaffold1157.6771
mRNA.BJAM.scaffold1157.6772ZGC:174356
mRNA.BJAM.scaffold1157.6773BTB DOMAIN TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold1157.6774
mRNA.BJAM.scaffold11571.21840
mRNA.BJAM.scaffold11573.21841DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold11573.21842
mRNA.BJAM.scaffold11577.21843
mRNA.BJAM.scaffold11578.21844HOMEOBOX PROTEIN ABDOMINAL-B
mRNA.BJAM.scaffold1158.6775
mRNA.BJAM.scaffold1158.6776
mRNA.BJAM.scaffold1158.6777
mRNA.BJAM.scaffold11580.21845
mRNA.BJAM.scaffold11580.21846
mRNA.BJAM.scaffold11581.21847-
mRNA.BJAM.scaffold11583.21848PHOSPHATIDYLSERINE DECARBOXYLASE
mRNA.BJAM.scaffold11583.21849CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
mRNA.BJAM.scaffold11583.21850ATP-DEPENDENT RNA HELICASE DBP3
mRNA.BJAM.scaffold11584.21851
mRNA.BJAM.scaffold11585.21852
mRNA.BJAM.scaffold11585.21853MAP/MICROTUBULE AFFINITY-REGULATING KINASE
mRNA.BJAM.scaffold11585.21854WD-40 REPEAT PROTEIN
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