About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1147.6725TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold1147.6726
mRNA.BJAM.scaffold1147.6727NUCLEOLAR COMPLEX PROTEIN 3
mRNA.BJAM.scaffold1147.6728COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
mRNA.BJAM.scaffold1147.6729CYSTATIN FAMILY MEMBER
mRNA.BJAM.scaffold1147.6730CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED
mRNA.BJAM.scaffold1147.6731
mRNA.BJAM.scaffold1147.6732PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold1147.6733
mRNA.BJAM.scaffold11471.21780UNCHARACTERIZED
mRNA.BJAM.scaffold11471.21781BETA-GALACTOSIDASE RELATED
mRNA.BJAM.scaffold11471.21782
mRNA.BJAM.scaffold11471.21783BETA-GALACTOSIDASE RELATED
mRNA.BJAM.scaffold11474.21784ZINC FINGER PROTEIN
mRNA.BJAM.scaffold11474.21785COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL
mRNA.BJAM.scaffold11475.21786ZINC FINGER PROTEIN
mRNA.BJAM.scaffold11476.21787
mRNA.BJAM.scaffold11476.21788
mRNA.BJAM.scaffold11476.21789PHOSPHOINOSITOL 3-PHOSPHATE-BINDING PROTEIN
mRNA.BJAM.scaffold11486.21790HOMEOBOX PROTEIN SIX
mRNA.BJAM.scaffold11487.21791SULFOTRANSFERASE SULT
mRNA.BJAM.scaffold11498.21792ZINC FINGER PROTEIN ZIC AND GLI
mRNA.BJAM.scaffold11498.21793
mRNA.BJAM.scaffold115.903
mRNA.BJAM.scaffold115.904LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold115.905VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
mRNA.BJAM.scaffold115.906VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
mRNA.BJAM.scaffold115.907
mRNA.BJAM.scaffold115.908
mRNA.BJAM.scaffold115.909BETA-HEXOSAMINIDASE
mRNA.BJAM.scaffold115.910SI:CH211-196P9.1-RELATED
mRNA.BJAM.scaffold115.911
mRNA.BJAM.scaffold115.912BETA-HEXOSAMINIDASE
mRNA.BJAM.scaffold115.913BETA-HEXOSAMINIDASE
mRNA.BJAM.scaffold115.914BETA-HEXOSAMINIDASE
mRNA.BJAM.scaffold115.915UNCHARACTERIZED
mRNA.BJAM.scaffold115.916
mRNA.BJAM.scaffold115.917ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold115.918
mRNA.BJAM.scaffold115.919
mRNA.BJAM.scaffold115.920
mRNA.BJAM.scaffold115.921TRANSMEMBRANE GTPASE FZO1
mRNA.BJAM.scaffold115.922GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN
mRNA.BJAM.scaffold115.923MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1
mRNA.BJAM.scaffold115.924
mRNA.BJAM.scaffold115.925
mRNA.BJAM.scaffold115.926MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1
mRNA.BJAM.scaffold1150.673439S RIBOSOMAL PROTEIN L12
mRNA.BJAM.scaffold1150.6735REGUCALCIN
mRNA.BJAM.scaffold1150.6736REGUCALCIN
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