About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold11425.21750
mRNA.BJAM.scaffold11425.21751ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
mRNA.BJAM.scaffold11426.21752SOLUTE CARRIER FAMILY 17
mRNA.BJAM.scaffold11426.21753SOLUTE CARRIER FAMILY 17
mRNA.BJAM.scaffold11426.21754HEAT SHOCK PROTEIN 90 FAMILY MEMBER
mRNA.BJAM.scaffold11426.21755HEAT SHOCK PROTEIN 90 FAMILY MEMBER
mRNA.BJAM.scaffold1143.6703S-ADENOSYLMETHIONINE SYNTHETASE
mRNA.BJAM.scaffold1143.6704NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
mRNA.BJAM.scaffold1143.6705INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
mRNA.BJAM.scaffold1143.6706G PATCH DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold1143.6707PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
mRNA.BJAM.scaffold1143.6708RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F
mRNA.BJAM.scaffold1143.6709PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
mRNA.BJAM.scaffold11430.21756
mRNA.BJAM.scaffold11432.21757DEOXYRIBONUCLEASE
mRNA.BJAM.scaffold11437.21758EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1
mRNA.BJAM.scaffold11438.21759
mRNA.BJAM.scaffold11439.21760ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER
mRNA.BJAM.scaffold11439.21761ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
mRNA.BJAM.scaffold1144.6710CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold1144.6711
mRNA.BJAM.scaffold1144.6712P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN
mRNA.BJAM.scaffold1144.6713UNCHARACTERIZED
mRNA.BJAM.scaffold1144.6714RIBOSOMAL PROTEIN L39E
mRNA.BJAM.scaffold1144.6715
mRNA.BJAM.scaffold1144.6716YTH YT521-B HOMOLOGY DOMAIN-CONTAINING
mRNA.BJAM.scaffold1144.6717
mRNA.BJAM.scaffold1144.6718CCR4 NOT-RELATED
mRNA.BJAM.scaffold1144.6719TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold11445.21762
mRNA.BJAM.scaffold11447.21763SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
mRNA.BJAM.scaffold11447.21764SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
mRNA.BJAM.scaffold11448.21765ANNEXIN
mRNA.BJAM.scaffold11448.21766ANNEXIN
mRNA.BJAM.scaffold11448.21767ANNEXIN
mRNA.BJAM.scaffold11449.21768BITESIZE, ISOFORM I
mRNA.BJAM.scaffold11455.21770CUTICLE PROTEIN
mRNA.BJAM.scaffold11458.21771TORSIN-1A-INTERACTING PROTEIN
mRNA.BJAM.scaffold11458.21772
mRNA.BJAM.scaffold1146.6720DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold1146.6721
mRNA.BJAM.scaffold11462.21774IFT140/172-RELATED
mRNA.BJAM.scaffold11462.21775IFT140/172-RELATED
mRNA.BJAM.scaffold11464.21776
mRNA.BJAM.scaffold11464.21777TRANSLATION FACTOR
mRNA.BJAM.scaffold11468.21778
mRNA.BJAM.scaffold11469.21779PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
mRNA.BJAM.scaffold1147.6722RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3
mRNA.BJAM.scaffold1147.6723MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
mRNA.BJAM.scaffold1147.6724
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