About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold12069.22080
mRNA.BJAM.scaffold12073.22081
mRNA.BJAM.scaffold12074.22082
mRNA.BJAM.scaffold12074.22083RIBOSOMAL PROTEIN S6 KINASE
mRNA.BJAM.scaffold1208.7015
mRNA.BJAM.scaffold1208.7016SARCOSINE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold1208.7017AMINOMETHYLTRANSFERASE
mRNA.BJAM.scaffold1208.7018GLYCERATE KINASE
mRNA.BJAM.scaffold12080.22084TRANSMEMBRANE PROTEIN 98
mRNA.BJAM.scaffold12080.22085CRISPR-ASSOCIATED EXONUCLEASE CAS4
mRNA.BJAM.scaffold12081.22086ARMADILLO SEGMENT POLARITY PROTEIN
mRNA.BJAM.scaffold12081.22087
mRNA.BJAM.scaffold12081.22088ARMADILLO SEGMENT POLARITY PROTEIN
mRNA.BJAM.scaffold12085.22089
mRNA.BJAM.scaffold12086.22090HISTONE H2B
mRNA.BJAM.scaffold12089.22091
mRNA.BJAM.scaffold12089.22092IMMUNOGLOBULIN
mRNA.BJAM.scaffold1209.7019
mRNA.BJAM.scaffold1209.7020INTEGRIN ALPHA
mRNA.BJAM.scaffold1209.7021CYTOCHROME C OXIDASE SUBUNIT 6B
mRNA.BJAM.scaffold1209.7022
mRNA.BJAM.scaffold1209.7023
mRNA.BJAM.scaffold1209.7024PROTEIN DISULFIDE ISOMERASE
mRNA.BJAM.scaffold1209.7025CYTOCHROME P450 FAMILY 3
mRNA.BJAM.scaffold1209.7026VILLIN
mRNA.BJAM.scaffold1209.7027PHOSPHATIDYLINOSITOL SYNTHASE
mRNA.BJAM.scaffold1209.7028NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
mRNA.BJAM.scaffold1209.7029NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
mRNA.BJAM.scaffold1209.7030
mRNA.BJAM.scaffold1209.7031HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE
mRNA.BJAM.scaffold12090.22093SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold12090.22094SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold12093.22095
mRNA.BJAM.scaffold12093.22096METABOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold12097.22097MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
mRNA.BJAM.scaffold12097.22098
mRNA.BJAM.scaffold12097.22099EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
mRNA.BJAM.scaffold12099.22100
mRNA.BJAM.scaffold121.962
mRNA.BJAM.scaffold121.963CALPAIN
mRNA.BJAM.scaffold121.964UNCHARACTERIZED
mRNA.BJAM.scaffold121.965
mRNA.BJAM.scaffold121.966TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12
mRNA.BJAM.scaffold121.967CYTOCHROME C OXIDASE SUBUNIT IV
mRNA.BJAM.scaffold121.968TUBULIN
mRNA.BJAM.scaffold121.969
mRNA.BJAM.scaffold121.970NUCLEAR MOVEMENT PROTEIN NUDC
mRNA.BJAM.scaffold1210.7032ANGIOTENSIN-CONVERTING ENZYME
mRNA.BJAM.scaffold1210.7033CASPASE
mRNA.BJAM.scaffold1210.7034SHOOTIN-1
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