About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1210.7035
mRNA.BJAM.scaffold1210.7036PROTEIN CBG16327
mRNA.BJAM.scaffold1210.7037
mRNA.BJAM.scaffold1210.7038PROSTAGLANDIN REDUCTASE
mRNA.BJAM.scaffold12101.22101
mRNA.BJAM.scaffold12101.22102
mRNA.BJAM.scaffold12101.22103N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
mRNA.BJAM.scaffold12101.22104NEUROBLASTOMA-AMPLIFIED SEQUENCE
mRNA.BJAM.scaffold12101.22105PENTRAXIN
mRNA.BJAM.scaffold12101.22106
mRNA.BJAM.scaffold12102.22107
mRNA.BJAM.scaffold12102.22108
mRNA.BJAM.scaffold12105.22109DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
mRNA.BJAM.scaffold12105.22110DYNEIN HEAVY CHAIN
mRNA.BJAM.scaffold12105.22111DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
mRNA.BJAM.scaffold12109.22112ZINC FINGER PROTEIN
mRNA.BJAM.scaffold12109.22113KRUEPPEL-LIKE TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold12109.22114AGAP004733-PA
mRNA.BJAM.scaffold12109.22115ZINC FINGER PROTEIN
mRNA.BJAM.scaffold12109.22116UNC-93 RELATED
mRNA.BJAM.scaffold1211.7039METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE
mRNA.BJAM.scaffold1211.7040SPHINGOMYELIN PHOSPHODIESTERASE
mRNA.BJAM.scaffold1211.7041SPECKLE-TYPE POZ PROTEIN
mRNA.BJAM.scaffold1211.7042
mRNA.BJAM.scaffold1211.7043SODIUM/HYDROGEN EXCHANGER
mRNA.BJAM.scaffold1211.7044HOMEOBOX PROTEIN ARISTALESS
mRNA.BJAM.scaffold1211.704520 KD NUCLEAR CAP BINDING PROTEIN
mRNA.BJAM.scaffold12110.22117CUTICLE PROTEIN
mRNA.BJAM.scaffold1212.7046PROLYL HYDROXYLASE-RELATED
mRNA.BJAM.scaffold1212.7047
mRNA.BJAM.scaffold1212.7048ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold1212.7049
mRNA.BJAM.scaffold1212.7050ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold1212.7051ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold1212.7052ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold1212.7053CHAPERONIN
mRNA.BJAM.scaffold1212.7054UBIQUITIN THIOLESTERASE PROTEIN OTUB
mRNA.BJAM.scaffold1212.7055
mRNA.BJAM.scaffold1212.7056
mRNA.BJAM.scaffold12122.22118STAR-RELATED LIPID TRANSFER PROTEIN 9
mRNA.BJAM.scaffold1213.7057ARSENITE METHYLTRANSFERASE
mRNA.BJAM.scaffold1213.7058-
mRNA.BJAM.scaffold1213.7059CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING
mRNA.BJAM.scaffold1213.7060EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
mRNA.BJAM.scaffold1213.7061CLASPIN
mRNA.BJAM.scaffold1213.7062D-AMINO ACID OXIDASE
mRNA.BJAM.scaffold1213.7063
mRNA.BJAM.scaffold12136.22119
mRNA.BJAM.scaffold12137.22120
mRNA.BJAM.scaffold12138.22121
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