About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold12277.22201BESTROPHIN
mRNA.BJAM.scaffold1228.7133
mRNA.BJAM.scaffold1228.7134
mRNA.BJAM.scaffold1228.7135CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold12280.22202RP42 RELATED
mRNA.BJAM.scaffold12280.22203EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
mRNA.BJAM.scaffold12281.22204ACROSIN-RELATED
mRNA.BJAM.scaffold12281.22205
mRNA.BJAM.scaffold12283.22206
mRNA.BJAM.scaffold12283.22207PDZ DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold12283.22208
mRNA.BJAM.scaffold12286.22209
mRNA.BJAM.scaffold12288.22210
mRNA.BJAM.scaffold1229.7136TRANSMEMBRANE PROTEASE SERINE
mRNA.BJAM.scaffold1229.7137PROTEIN STAR
mRNA.BJAM.scaffold1229.7138PROTEIN STAR
mRNA.BJAM.scaffold1229.7139OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold1229.7140LEUCINE RICH REPEAT FAMILY PROTEIN
mRNA.BJAM.scaffold1229.7141PROTEIN STAR
mRNA.BJAM.scaffold1229.7142
mRNA.BJAM.scaffold1229.7143AP ENDONUCLEASE
mRNA.BJAM.scaffold1229.7144
mRNA.BJAM.scaffold1229.7145RNA PROCESSING PROTEIN LD23810P
mRNA.BJAM.scaffold1229.7146
mRNA.BJAM.scaffold12296.22211
mRNA.BJAM.scaffold12296.22212B-CELL TRANSLOCATION GENE
mRNA.BJAM.scaffold12297.22213
mRNA.BJAM.scaffold12297.22214
mRNA.BJAM.scaffold12298.22215TBP-1 INTERACTING PROTEIN
mRNA.BJAM.scaffold12299.22216
mRNA.BJAM.scaffold123.974VITELLOGENIN-RELATED
mRNA.BJAM.scaffold123.975VITELLOGENIN-RELATED
mRNA.BJAM.scaffold123.976
mRNA.BJAM.scaffold123.977VITELLOGENIN-RELATED
mRNA.BJAM.scaffold123.979VITELLOGENIN-RELATED
mRNA.BJAM.scaffold123.980VITELLOGENIN-RELATED
mRNA.BJAM.scaffold123.981NUCLEOTIDE KINASE
mRNA.BJAM.scaffold123.982SUGAR KINASE
mRNA.BJAM.scaffold123.983COFILIN-RELATED
mRNA.BJAM.scaffold123.984SOLUTE CARRIER FAMILY 35 MEMBER B
mRNA.BJAM.scaffold123.985
mRNA.BJAM.scaffold123.986
mRNA.BJAM.scaffold123.987UNCHARACTERIZED
mRNA.BJAM.scaffold12300.22217MALE FERTILITY FACTOR KL5
mRNA.BJAM.scaffold12301.22218
mRNA.BJAM.scaffold12302.22219
mRNA.BJAM.scaffold12302.22220ZNF44 PROTEIN
mRNA.BJAM.scaffold12307.22221RIBOSOMAL PROTEIN L15
mRNA.BJAM.scaffold12308.22222
mRNA.BJAM.scaffold12311.22223
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