The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032870671.1 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |
| XP_032870672.1 | GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 |
| XP_032870673.1 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
| XP_032870674.1 | PROTEIN INTURNED |
| XP_032870675.1 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
| XP_032870676.1 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
| XP_032870677.1 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
| XP_032870678.1 | DUAL OXIDASE 2 |
| XP_032870679.1 | COMPLEXIN |
| XP_032870680.1 | LYSYL OXIDASE-LIKE-RELATED |
| XP_032870681.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032870682.1 | PROTEIN CDV3 HOMOLOG |
| XP_032870683.1 | UNCHARACTERIZED |
| XP_032870684.1 | |
| XP_032870685.1 | NADPH OXIDASE |
| XP_032870686.1 | NADPH OXIDASE |
| XP_032870687.1 | NADPH OXIDASE |
| XP_032870688.1 | DUAL OXIDASE 2 |
| XP_032870689.1 | POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP |
| XP_032870690.1 | PROTEIN CDV3 HOMOLOG |
| XP_032870691.1 | BASIGIN RELATED |
| XP_032870692.1 | BASIGIN RELATED |
| XP_032870693.1 | BASIGIN RELATED |
| XP_032870694.1 | BASIGIN RELATED |
| XP_032870695.1 | BUTYROPHILIN |
| XP_032870696.1 | BUTYROPHILIN |
| XP_032870697.1 | BUTYROPHILIN |
| XP_032870698.1 | BUTYROPHILIN |
| XP_032870699.1 | BUTYROPHILIN |
| XP_032870700.1 | PROTEIN CDV3 HOMOLOG |
| XP_032870701.1 | FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE |
| XP_032870702.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| XP_032870703.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032870704.1 | COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER |
| XP_032870705.1 | SORBITOL DEHYDROGENASE |
| XP_032870706.1 | PROTEIN CDV3 HOMOLOG |
| XP_032870707.1 | SORBITOL DEHYDROGENASE |
| XP_032870708.1 | - |
| XP_032870709.1 | SPERIOLIN-BINDING FACTOR |
| XP_032870710.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| XP_032870711.1 | TRANSMEMBRANE PROTEIN 266 |
| XP_032870712.1 | GDP-D-GLUCOSE PHOSPHORYLASE 1 |
| XP_032870713.1 | TYROSINE-PROTEIN KINASE |
| XP_032870714.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| XP_032870715.1 | SERINE INCORPORATOR |
| XP_032870716.1 | LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE |
| XP_032870717.1 | SEMAPHORIN |
| XP_032870718.1 | - |
| XP_032870719.1 | SORTING NEXIN 17 AND 27 |
| XP_032870720.1 | UNCHARACTERIZED |
