The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032870821.1 | PYRUVATE KINASE |
| XP_032870822.1 | PYRUVATE KINASE |
| XP_032870823.1 | PYRUVATE KINASE |
| XP_032870824.1 | PYRUVATE KINASE |
| XP_032870825.1 | PYRUVATE KINASE |
| XP_032870826.1 | PYRUVATE KINASE |
| XP_032870827.1 | FORKHEAD BOX PROTEIN |
| XP_032870828.1 | SYNAPTOTAGMIN |
| XP_032870829.1 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |
| XP_032870830.1 | TRANSMEMBRANE PROTEIN 14, 15 |
| XP_032870831.1 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |
| XP_032870832.1 | F-BOX/TPR REPEAT PROTEIN POF3 |
| XP_032870833.1 | CASEIN KINASE-RELATED |
| XP_032870834.1 | CASEIN KINASE-RELATED |
| XP_032870835.1 | PROTEIN INTURNED |
| XP_032870836.1 | CASEIN KINASE-RELATED |
| XP_032870837.1 | CASEIN KINASE-RELATED |
| XP_032870838.1 | CASEIN KINASE-RELATED |
| XP_032870839.1 | STEROL DESATURASE |
| XP_032870840.1 | |
| XP_032870841.1 | SODIUM/NUCLEOSIDE COTRANSPORTER |
| XP_032870842.1 | THYROID RECEPTOR INTERACTING PROTEIN RELATED |
| XP_032870843.1 | FATTY ACID ACYL TRANSFERASE-RELATED |
| XP_032870844.1 | THYROID RECEPTOR INTERACTING PROTEIN RELATED |
| XP_032870845.1 | THYROID RECEPTOR INTERACTING PROTEIN RELATED |
| XP_032870846.1 | SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 |
| XP_032870847.1 | SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 |
| XP_032870848.1 | SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 |
| XP_032870849.1 | SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 |
| XP_032870850.1 | PCNA-ASSOCIATED FACTOR |
| XP_032870851.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| XP_032870852.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| XP_032870853.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| XP_032870854.1 | ALPHA-MANNOSIDASE |
| XP_032870855.1 | ALPHA-MANNOSIDASE |
| XP_032870856.1 | |
| XP_032870857.1 | LD33804P |
| XP_032870858.1 | TBC1 DOMAIN FAMILY MEMBER 7 |
| XP_032870859.1 | UBIQUITIN THIOESTERASE |
| XP_032870860.1 | UBIQUITIN THIOESTERASE |
| XP_032870861.1 | SIN3B-RELATED |
| XP_032870862.1 | SIN3B-RELATED |
| XP_032870863.1 | SIN3B-RELATED |
| XP_032870864.1 | SIN3B-RELATED |
| XP_032870865.1 | SIN3B-RELATED |
| XP_032870866.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032870867.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032870868.1 | TBC1 DOMAIN FAMILY MEMBER 7 |
| XP_032870869.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032870870.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
