The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032870521.1 | GALACTOSE-3-O-SULFOTRANSFERASE |
| XP_032870522.1 | GALACTOSE-3-O-SULFOTRANSFERASE |
| XP_032870523.1 | GALACTOSE-3-O-SULFOTRANSFERASE |
| XP_032870524.1 | NEGATIVE ELONGATION FACTOR E |
| XP_032870525.1 | - |
| XP_032870526.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032870527.1 | TRYPSIN-RELATED |
| XP_032870528.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032870529.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032870530.1 | ZINC FINGER PROTEIN |
| XP_032870531.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032870532.1 | - |
| XP_032870533.1 | AP COMPLEX SUBUNIT MU |
| XP_032870534.1 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| XP_032870535.1 | |
| XP_032870536.1 | HISTONE H4 |
| XP_032870537.1 | HISTONE H3 |
| XP_032870538.1 | HISTONE H3 |
| XP_032870539.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032870540.1 | - |
| XP_032870541.1 | |
| XP_032870542.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032870543.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032870544.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032870545.1 | |
| XP_032870546.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032870547.1 | GALACTOSE-3-O-SULFOTRANSFERASE |
| XP_032870548.1 | GALACTOSE-3-O-SULFOTRANSFERASE |
| XP_032870549.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 |
| XP_032870550.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032870551.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032870552.1 | SI:CH211-266K22.6 |
| XP_032870553.1 | HISTONE H2B |
| XP_032870554.1 | B-CELL ANTIGEN RECEPTOR COMPLEX-ASSOCIATED PROTEIN |
| XP_032870555.1 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 2 |
| XP_032870556.1 | RAN GUANINE NUCLEOTIDE RELEASE FACTOR |
| XP_032870557.1 | RAN GUANINE NUCLEOTIDE RELEASE FACTOR |
| XP_032870558.1 | UNCHARACTERIZED |
| XP_032870559.1 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| XP_032870560.1 | HISTONE H3 |
| XP_032870561.1 | HISTONE H2B |
| XP_032870562.1 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 1 |
| XP_032870563.1 | CLAUDIN |
| XP_032870564.1 | RE38146P |
| XP_032870565.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032870566.1 | |
| XP_032870567.1 | DRONGO, ISOFORM F |
| XP_032870568.1 | DRONGO, ISOFORM F |
| XP_032870569.1 | DUAL SPECIFICITY PROTEIN KINASE |
| XP_032870570.1 | DRONGO, ISOFORM F |
