The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032870421.1 | DNA-DIRECTED RNA POLYMERASE |
| XP_032870422.1 | CALPAIN |
| XP_032870423.1 | RETICULON-LIKE PROTEIN |
| XP_032870424.1 | RETICULON-LIKE PROTEIN |
| XP_032870425.1 | RETICULON-LIKE PROTEIN |
| XP_032870426.1 | AGAP005574-PA |
| XP_032870427.1 | AGAP005574-PA |
| XP_032870428.1 | AGAP005574-PA |
| XP_032870429.1 | AGAP005574-PA |
| XP_032870430.1 | AGAP005574-PA |
| XP_032870431.1 | CELL ADHESION MOLECULE |
| XP_032870432.1 | AGAP005574-PA |
| XP_032870433.1 | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY |
| XP_032870434.1 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL |
| XP_032870435.1 | EXOSOME COMPLEX COMPONENT |
| XP_032870436.1 | HSC70CB, ISOFORM G-RELATED |
| XP_032870437.1 | EXOSOME COMPLEX COMPONENT |
| XP_032870438.1 | STRIATIN |
| XP_032870439.1 | STRIATIN |
| XP_032870440.1 | CELL ADHESION MOLECULE |
| XP_032870441.1 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| XP_032870442.1 | FUKUTIN RELATED PROTEIN |
| XP_032870443.1 | |
| XP_032870444.1 | YEAST SPT2-RELATED |
| XP_032870445.1 | NF-KAPPA-B INHIBITOR ALPHA |
| XP_032870446.1 | SERINE/THREONINE-PROTEIN KINASE TAO |
| XP_032870447.1 | SERINE/THREONINE-PROTEIN KINASE TAO |
| XP_032870448.1 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI |
| XP_032870449.1 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI |
| XP_032870450.1 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI |
| XP_032870451.1 | HISTONE H3 |
| XP_032870452.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| XP_032870453.1 | EH DOMAIN |
| XP_032870454.1 | GALECTIN |
| XP_032870455.1 | GALECTIN |
| XP_032870456.1 | RHO GTPASE-ACTIVATING PROTEIN 190 |
| XP_032870457.1 | RHO GTPASE-ACTIVATING PROTEIN 190 |
| XP_032870458.1 | RHO GTPASE-ACTIVATING PROTEIN 190 |
| XP_032870459.1 | SYNAPTOSOMAL ASSOCIATED PROTEIN |
| XP_032870460.1 | SYNAPTOSOMAL ASSOCIATED PROTEIN |
| XP_032870461.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| XP_032870462.1 | SYNAPTOSOMAL ASSOCIATED PROTEIN |
| XP_032870463.1 | CYTOCHROME C OXIDASE POLYPEPTIDE 7A |
| XP_032870464.1 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
| XP_032870465.1 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
| XP_032870466.1 | FOS TRANSCRIPTION FACTOR-RELATED |
| XP_032870467.1 | VASCULAR ENDOTHELIAL GROWTH FACTOR |
| XP_032870468.1 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| XP_032870469.1 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| XP_032870470.1 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
