The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032870171.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| XP_032870172.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| XP_032870173.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| XP_032870174.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| XP_032870175.1 | NOTCH LIGAND FAMILY MEMBER |
| XP_032870176.1 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
| XP_032870177.1 | 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER |
| XP_032870178.1 | 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER |
| XP_032870179.1 | BTB POZ DOMAIN CONTAINING 7 |
| XP_032870180.1 | BTB POZ DOMAIN CONTAINING 7 |
| XP_032870181.1 | - |
| XP_032870182.1 | ATAXIN 1 |
| XP_032870183.1 | PROTEASOME SUBUNIT ALPHA/BETA |
| XP_032870184.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 29 |
| XP_032870185.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 29 |
| XP_032870186.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| XP_032870187.1 | B-CELL LYMPHOMA/LEUKEMIA 11 |
| XP_032870188.1 | ATAXIN 1 |
| XP_032870189.1 | CLOCK-INTERACTING PACEMAKER |
| XP_032870190.1 | CLOCK-INTERACTING PACEMAKER |
| XP_032870191.1 | CLOCK-INTERACTING PACEMAKER |
| XP_032870192.1 | CLOCK-INTERACTING PACEMAKER |
| XP_032870193.1 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
| XP_032870194.1 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
| XP_032870195.1 | ENOYL-COA HYDRATASE |
| XP_032870196.1 | OPTIC ATROPHY 3 PROTEIN OPA3 |
| XP_032870197.1 | ATAXIN 1 |
| XP_032870198.1 | HISTONE H2A |
| XP_032870199.1 | HISTONE H2B |
| XP_032870200.1 | SYNAPTOSOMAL ASSOCIATED PROTEIN |
| XP_032870201.1 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 |
| XP_032870202.1 | RHO FAMILY GTPASE |
| XP_032870203.1 | HIGH MOBILITY GROUP B PROTEIN 12-RELATED |
| XP_032870204.1 | HIGH MOBILITY GROUP B PROTEIN 12-RELATED |
| XP_032870205.1 | ATAXIN 1 |
| XP_032870206.1 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
| XP_032870207.1 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
| XP_032870208.1 | CALPAIN |
| XP_032870209.1 | HISTONE H2B |
| XP_032870210.1 | CYTOCHROME P450 508A4-RELATED |
| XP_032870211.1 | 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL |
| XP_032870212.1 | 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL |
| XP_032870213.1 | SPHINGOSINE KINASE |
| XP_032870214.1 | ATAXIN 1 |
| XP_032870215.1 | FAM98 |
| XP_032870216.1 | CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT GAMMA |
| XP_032870217.1 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| XP_032870218.1 | THAP DOMAIN-CONTAINING PROTEIN 2 |
| XP_032870219.1 | |
| XP_032870220.1 | CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT GAMMA |
